SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24643_c1_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_YTH_domain-containing_family_protein_1_isoform_X3_[Papilio_machaon]
Ontology
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:1903679 P positive regulation of cap-independent translational initiation
GO:1990247 F N6-methyladenosine-containing RNA binding
Transcript
Level		FPKM:3.44 TPM:3.18
ORF Entry
Sequence
(Nucleotide)
GTAAGTCGCCATTACCAAACGTCCAACTCCGTACGTTTTATGTCGGATGTTATGTGAATT
TTTGTACACTACGGACATTTTTGACATTATTTGGTGACTCTCATATTTGTAAGACTCAGT
GTAGTGAAACCGATGTGATTCCTTTCGTAATTGCTGTGATTAAAGACTTCAATAAGTGTT
TTAGGTCTTAAAATCCCGGCCAATGTCAGCAGGCGTGTCAGATCAGCGGATGAAAGGGCA
AGGGAATCAAGTTACAAATGCACCGAAAGAACAACATTTAGAAAGCGGCGGTGACGAGTT
AGCTGAGGTACCATGGCGGCATCAACAGCAACCTTCTTATGCGCCTCCTATCTCGTCGGC
CGACCCCTACAGCGCGGCAGGTGTGTTTGGACCTTCAACTACTCCATTCTCAACAGCGGC
ATTTGGACAACCTGCCTCCACCTTCAACTATTTTCACGGCAACGGTGACTATTCGACATG
GGGTCAGTTAGGTCGTGCAAAACAATATGATGATTACTATAGGGCTGATGGACTTTACGT
GCCAGATGGTGTTAAAACAGTTGAAGCTGGGGTACAAGCCCTGTCCCTTGGTGACCACAA
ACAGGACAAGGACCGTCAACCAGAGCTCAAAGATATCTCTTCAGTTTCACAACCCAAAAA
GATGACTTGGGCGTCAATTGCCAGTCAGCCGGCAAAGCCGGCGCCTTCTTCGCAGAGCGG
CGTAATAAAGAAGAAAGGGCCTGGTATGCCGCCCCCACCTATAATACCCGGCAAGCACAA
TATGGATATAAGCACGTGGGAGGCAGGTAAATCTGCTAATATCGTAAGTGCACCACCACC
GCCGCCTCCAACTATGCAACCCCCGGTGCCGGCACAACAGCCTATGCCTACACCTGCTCC
GGTTCCAGCTCCAGTATCTGTTCCAATCCAGCAGCGCGGGCCGCCGCCTCCGCAACACCA
GCCTCCACCTTCATGGGCCCATGCACCTCGTGCTCCACCTCCGCATCAACCCATGCAGCC
TCATCAGCCGCGCCCTCCGATGCCAGCCCCACCAATCGTCTCGCAACCACCACCACCAGT
TGCTGTTCCACAAGTACCTCACCCTGTGCTTGATGAACTCCGTATTAAAAACGATTACAA
TCCCAAGGAGTTTGACTTGACTGCCCCGATGACTCGATTCTTTGTTATTAAATCTTATTC
AGAAGATGACATACATCGTAGTATCAAATACGAGATCTGGTGCAGTACAGAACATGGTAA
CAAACGTCTCGATGCTGCTTACCGCGAGAGGGAGAAGGAAGGTGGAATGGTTTATCTATT
TTTCTCAGTAAATGGAAGTGGACATTTCTGTGGAATGGCTCGTATGATGAGCGCAGTAGA
TTATAATTCCAATTCTAGCGTCTGGTCGCAGGATAAATGGAAAGGGCAGTTTCGTGTCAA
GTGGATTTATGTGAAGGACGTGCCGAATGCACAGCTCCGTCATATAAAATTAGAAAATAA
TGAAAATAAACCAGTGACAAACTCGCGTGATACTCAAGAAGTGCCCCACCCCAAAGGCCT
ACAGGTCTTACGCATAATGCACTGCTACTGTCACTCGACGTCCATATTCGATGATTTTAT
TCATTATGAACGGCGTCAAGAAGAGGAGGATTCGCGAAAGGTCCCCGCCCACCCGGAAAG
TAGCCGGGACGAACACGAGGGCGGTCGCGGCTATCGCAACTATCGTGAGCATCGCGAGCA
CAGGGACGGACGCGAGCACAGAGACGGGGCGAGAGAGCCGCGAGACATGCGCGACACGCG
TGAGTACCGCGAGCCGCGGGACCCGCGGGACCAACGCGACCAACGTGACCAGCGTGACCA
GCGTGACCAACGTGACCCGAGAGACTCGCGCGATCATCGCGACGCACGTGATTACCGCGA
GCACCGTGACGAACGTGAGAACAGAGACTATTCATATCGTGATTCAGGTTACAGGCCTCA
ACATAAGGACCGAGATGGTTCCCGAGGTCGAGGACGTCCCCGCAATTAATTCTGTCAGAC
GATCTTGGACGAGGACAGGCTTCTCCCCATAGACAACTAGTAGTCGCCTTATTAATTGGT
AAAGCAGTACATCAAACGTATGTCGGGAGACGTATATAGAGGGGAATCAGAAAATGCAGG
AGAAGACGTGACCGGTGAATGTTGCGTTTTAGTCAGAACAATGTTACATAAAGTTGTTTT
AAACAGTGCATTGCTAAAAAAAACTCAACAAATTTAAATATGTGCTAAATAATGTTTTGT
ACTGAATGAACATTTAAACAAATGCCTAGTGGACAGATGTTGTAATTAAATGCCGAAGCA
TGTCGTGCCGTCAGTAACGCGCCGCGGCCAGTGAAATCGTGGACTTTATTTTCAAATTCG
TGGACTGAATCAATATAATATAGTAATTTTTATAACTAGGAATTTCCGTGGTGAGAGGTG
ATGATCCTTTTGATTGGGATTGATGTTATGAAATAATAAAACTTAAAATAGAGCACAGGC
TCTAGTTTTATAATGGTATAATACCTCATGCCTATATTGATAATGTGAAATGTCATCATG
ACTTATTGTAATTTTTATATTACAAACATTATAATCAAATGGGGTATGGAACTTTTGTAT
ACATTTTTAATACCAATATATGGAACAAGGATGAATTCTCTCGTGGCATTTAGTTCAGTT
TTACTCTGGTCCGTTTAATTTTATGTAATTTAACATGATTTCATTATAACTTGTAATAAA
TGTGCAGTGCATGGGAGACTGGTGTTTAGTTATACTGTGACCAATTTGCTGGCCAAAAGG
GGCTGTTATTCGAGTTTTAGATTATGTACTGTTCATTTTTGAATCATTAATGTTATGTAT
ATATGTATATGTGTTCTTTTCAAAAGTAATGTTCTATTTGTAAGTAAAACTACAGTGTGA
CGAGAGAAACTTGACAATCAATAAGATGGTTATCGTGATAAATGTTAAAAGATTATTGCT
TTTTTTGTCCCTACGTTATTTTCCCTGCCATCGTTTGAAAGTGCCTTGTTGAGTTCAGAA
GATGGTGAACATCGGGTATTTTGTTTAGTAGACTATTTTTGTAGCTAGCTACTTCTCGTT
TTTGTTGAACATTCAAAAGTAGTTTATATTTTGCTTGATGCATTCAATACGAAACGAAAA
CGCTGTTTTTATTTCAATGTTGTTTTTTTTTATAAATTTGTTCCTTTATAATTTTTATCG
TACTTTGTAGATTCCACTACTGCAAATTTTTACATCTAGTAAATGTATTAAAAGCCTACT
GTAGAAAT
(3308 bp)

- SilkBase 1999-2023 -