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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24540_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_ATP-dependent_RNA_helicase_Ddx1-like_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006302 P double-strand break repair
GO:0007283 P spermatogenesis
GO:0008026 F helicase activity
GO:0008143 F poly(A) binding
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0033677 F DNA/RNA helicase activity
GO:0042254 P ribosome biogenesis
GO:0048477 P oogenesis
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:1903506 P regulation of nucleic acid-templated transcription
Transcript
Level		FPKM:15.49 TPM:14.35
ORF Entry
Sequence
(Nucleotide)
GTCACCGGTACCCATCTGTGCACATACATACCGTACGCTGAATAAAACTGAAAACACTAT
TTAAAATAGCATAATTCTTTAAAAGATGACTGCTTTCGAAGAATTTGGTGTGCTGCCTGA
AATAGGCAAAGCTATTGAAGAAATGGATTGGACTCTACCCACTGATGTCCAAGCCGAAGC
TATTCCCCTAATCTTAGGCGGTGGAGATGTACTTATGGCAGCCGAAACTGGCAGTGGAAA
GACAGGAGCATTCTGTTTACCTATATTGCAGATTGTCTGGGAAACCTTGAAAGATATGCA
GGAAGGAAAAACCGGTAAAGTAATAACACAAACGTCTTCTGAGTGTACCATGTCATTTTT
CGATCGCACTGACGCACTGGCTGTTACTCCCGACGGGTTACGGTGTCAATCCAGAAATCA
AAAAGACTGGCACGGGTGTAGGGCCACCAAAGGTCTTCATACGAAAGGTGCATATTACTT
TGAAGCCACTGTCACTGATGAGGGCTTATGCCGTGTCGGCTGGTCTACACAAGCGGCAAA
GCTGGATCTTGGAACTGACAGGCTAGGCTATGGATTTGGTGGTACAGGCAAGAAATCAAA
TTGTAAGCAATTTGATGATTATGGCGAGGCTTATGGGATGAATGATGTAATTGGCTGTTT
CCTGAATTTAAATAATGGTGAAATTCGATACTCTAAAAACGGAGAAGACTTGGGTGTGGC
TTTCAGTCTTGATTCATCTAGAAAGTCAGACTGTTACTTCCCTGCAGTTGTCTTGAAAAA
TGCTGAGATGAGTTTTAACTTTGGTGCCACACCATTTAAGTACCCACCACCAAACGGATA
CATAGCAATCAGTCAAGCACCCAAAGAAAACGTCAAGCAGAATGTTATAGCCGCTGTAGC
TTCAACAGATATTAAACCAGTGAATAATGCACCACAGGCTATTATTATTGAGCCGTCCAG
AGAATTAGCGGAGCAGACCTGTACACAATTTACGAAATTCAAGAAGTATTTAGAAAATCC
CAAAATTCGGGAGCTGCTGGTTGTTGGAGGTATAAATGTTAAAGATCAAATTAACCAGTT
GAACTGTGGGGTGGATGTCGTCGTTGGGACGCCGGGACGCTTGGAAGACCTTATCCAAGG
AGGATACTTATCACTGACACATTGCCGTTTCTTTGTCTTGGACGAGGCTGATGGTCTCCT
GAAAGCGGGTTACGGAGAACTGATTGAACGCCTCCATCGTCAGATCCCGAAGATAACATC
CGATGGACGGAGACTGCAGATGGTTGTGTGTTCGGCAACCCTGCACGCATTCGAAGTCAA
GAAAATGGCTGAAAAATTAATGCACTTTCCGACTTGGGTCGATTTGAAAGGGGAAGACGC
AGTTCCTGAGACCGTACACCATGTTGTTGTGAACGTAGACCCGCAAAAGGACAGCTCCTG
GCAAACCCTGCGCAAGCACGTGCAGACCGACGGTGTGCACGCTAAGGACAACATTCGAAG
CGGCAACACAACGCCCGAAACATTGTCTGAAGCTGTTAAGATACTGAAGGGAGAATACTG
TGTGCGCGCCATCAGGGAACACAAAATGGACCGGGCCATAATATTCTGCCGCACTAAACT
GGATTGCGACAACCTCGAGCGGTACTTCAAAACGTTCGGCAATGAGCTGTCCTGTGTTTG
CCTGCACGGCGACCGAAAACCAAAGGAGCGCAAAGACAATTTGGAGATATTCAAGAACAG
CCAAGTGAAGTTTTTGATTTGCACCGACGTCGCTGCTCGCGGCATCGACATCTCGGGCCT
GCCTTTCATGATCAACATAACGCTTCCCGACGAAAAGTCCAACTACGTACATCGCATCGG
GCGCGTCGGTCGCGCGGAACGCATGGGCCTGGCCATCAGTCTCGTCTCCACCGTACCCGA
AAAGGTATGGTATCATGGCGAGTGGTGTTCATCTCGCGGACGGAACTGCTGGAACACTAA
TCTGATTGACGACAAACCTAAGGGATGCTGCATGTGGTACAATGAACCTCAGTACCTGGC
GGATATTGAAGATCACCTAAATATCACGATACAGCAAGTCGAGACAGATATGAAAGTCCC
ATCCAATGAGTTTGACGGTAAAGTAGTTTACGGTGAAAAAAGAAAACAAGCTGGTTCCGG
ATACCAAGACCATGTCAGTCAAATGGCGCCTGTTGTGAAATCTCTGCAAGAGCTAGAGTC
GCAAGCACAACTCTACTATCTTAAAATGCATCATAATGTCTCCATTTCCTGAATCAGAAA
TATAATTAAAATCTCTACTAATTTATTGTCGCATATTAATTAAACTGATTAGAGCGCAGG
TGACTTTTATTTAAAATAAATATTTAACAGG
(2371 bp)

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