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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24538_c1_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_5-A-like_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.04 TPM:0.96
ORF Entry
Sequence
(Nucleotide)
AGTATAAGTATCTGATCGTGCGGGGTGTTCGCAGGCTACGATGTCTTGGCGAAGTCGAGA
GGAGCGCTGCTCGAGGTGGGACACCAACAAATGGGAACTCCGCGATCGGTCGCCTGTATG
GGAGCCTAGGAACGTCAGCCCTGAGTGCAGGTCGCCATCCCGACACCGACACTCGCATGA
TAGACGGCCTCGTCACGAGCGCGACTTTCGGCGTGACCGCCACGATCGGGATCGCGACCG
TGACCGAGAACGCGACAGAAAACGGTACGAGGAAGCCCCCGCGCCCCCCTCGCCGCCCGT
TATCAGCGATGACAAAAAAAGCTCACGGTCTAGTAGTAGATCCGATAGTCGTGACAGGGA
CAGGTCTGATATGGAAATAGAAAAGGACAAGCACCAGGATGAGGTGCAGAACAACGCATC
ACCGGGTGATTGGATCTGCAAGTGTGGTCTATACAACTTTAAAAGACGTCAGGTCTGTTA
CCGTAGAACTTGTAATGGGAAAAGATCGGAGGGTGTAGTTTATGGAGGTGATGGGGATCG
TAACGGTGTAGTCGAAACACCTGGCATCACAAAGAGGTTACTCTTTAGGAGGCTAGATGC
TTTGACTACTGAAGAAAATATATTGGAAGAGCTCAAACTACGTTGCAGTAAAGAAGTTCT
AGAGTTAATTGTAGGTATTTCAATTGGTAGAGAAACTTTAACAGGTGCATCAAAGTGTCT
CGCCTACATCAATTTCAACTCCATAGCAGATTCTACAACAGCACATACAGAGTTGGTGAA
TCTCCAACCACCATTAAGGATTGACGGTCGAGAAGTGCTTATAAGCTTTTACAATGAACC
TAAAAAAATTGTTAAACCAACACAAGTTGACTATACGTCATACTACTCTCAAATGTCTTC
GTACAGTGGTGCAACAACTCAAGCAATGTCTGAGGCTGATAGAGTCAATGCAGCAGCTGC
AGTAGCTCAGTCTGCTATATCGGCAGCCCAGGCTAGACAGCTATCATGGACGCCAGTTGG
TGCTGTACCTTTCACTGGTACTACCCAAACTACAAAAACAAATGTACCCATAGGTGATGG
GAAGACAGTTTATCCTGCCCCAGATGTGAGAACATTCATGTATGATGAGTCATCTGGTTA
TTATTATGACCCGTCAACTTGTTTATACTATGATGGGAAGACACAATATTTTTATAATAG
TCAAATCAGTCAATATATGTATTGGGATGGTAAAACAAACACTTATGTTGCTGCAACACA
GGCTCAGAATGCTGAACAAAACAAACAAAGAGAGGCCAAGGAGCCTGATGAAAAGAAAAG
GAGAGATAAAGAAGACAAAGTTAAAGTAGCTAAAAAGATAGCTAAAGATATGGAAAGATG
GGCACGGACTCTAAATCAAAAGAAAGAGAATGCTCGGAGTAACTTTGTTATGGAACAACC
AACTGACACAAGTGCTAGCAAAGGCTCAGCAGACATTGGTTTTTCAGTACTAGGAGCTGG
ACCATCATTAACTCATGTAAGAGAAATATCCCCACCTCCCAACACAGATGAATTCTTGGT
CAAAAAGATCTCAGAACCAGTATTTGATAATGATGATGACATTATTGACTGGGACAAATT
AACCTGCTTGTTATGCAAAAGGAAATTCCCTTCTGTAGAAGTGTTGAATAAGCATAAAGT
TATGTCAGACTTGCACAAACAAAATCTAGTTGAATTTAGGAAGAAGAATGACTTGATTCC
ACAGATGAATGGTTATAGAGACAGGGCAGCTGAGCGACGTATGAAATTTGGTGAAGATGA
GCCTCCAATGATAAGAAAACGTTATGAGCCTTCTGAACCAATAGGTCCACCCATTAACCC
GCACCCACCTCCAAATGTAGTAGATACAATAGGAGGTAAAATGCTGCAAAAAATGGGCTG
GTCGGAAGGTCGAGGTTTAGGTAAGACTGAGCAGGGACGAATAGCTCCCATAGAAGCAGA
ACAGAGGCCAAGTTTAGCTGGTCTGGGGCAGAAAAGAGGTATATACACTCCCACACCTGG
TGAAACATATCGCGATACAGTTAAGAAACTTATGATAGCAAGATATAAGGAAGTTGTTGG
ACAAGAAGAAGGGAAATAGATTCGACCTGGGATTCTACAACGCTCCCGTCACACGCGTAT
TCGACAATCGGTGAGTAATTAATATTATAAGTGACCTTTTTCATACAGGTGAATAATTTC
TATGTGGGAAACGTCGTGATTGCCTTTTTATCGTGAATTTTTACAGCAAAATTTGATGTT
GACACTTTCGGTAACAACTTATTTATTTTTACATCTTCTTTGTGACTCGGGGAAATAGTA
CAAACGTTCCTAGATTAAATTTTTTTTTATGAGAAATTGTCAACATCCTTTCCGATCTCC
GAATGTTTAAGACACAATGGAAACAGAAGACAAAAAGCGTGAAGAATTGTGACTAGTTTG
TGCAAGGTGTTGTGAACCAAGAGATAACACTGACATTTTTGACAATTTACATTGCAGAGT
CTACGCGCGAAGCTGGAACCACGTGCCAAACAAAATATTAAAAAGTACTTCATTTTATAC
TCGTTGGATCGGAAATGAATTGATCAAACGCCATTTTAAAAATATTTAGCTTTCTTCCGT
AGCGTTTCGTGTATAGTTTAACTTTAATGTATATATATAAAATAATGATGTAGTAAGGAA
TTTTGAGATTGCGTTTGATTGTAAATAAAGATAAATATAGGTAGGTTATATTATAAAAAC
ACGCTCTAATAGTAAGCCCAAAAATTAAAGTAATATTTTAATTGTAGTGTTTTTCGGGGC
AAGATATTACGCTAAAGTAATGAAACTAATGTATTTTCATTGATGAATGTCAATATTTAA
GTTAATCTGCGTTGATTTTGTGAACATTACGTTGGCTAGGTCGATACGGTCTAGCTAATG
AAAGCCTGTCGAAGATGAGTTCTTGTACAAGATTAAATTAAGCCTAAACATAGGTGTTCA
TTTAAGCTAAATTTAATGATGATTATTACAATAAAGACATAAATAATTTACAGAGATTAG
TATTAAAAGGTAGGTAATCAAGTTGCATAATTGTTGTTAAAATAAATGTATATACATGAA
ATCCTAAACTTTATAGAAGCGCCGAAATGCGCCCTTGTCAGCTGTACGGTAGCATTTTCC
CGTAACTTATAATTTGTACTCAATAAGTGCATACTAGTCGATTGAATTTGCCGTCCTAGT
AAAACATCACAACGACGTCTGTTGATGGATTCTATTCGATAATAAAAGAATGATTTATTT
TAATAAAAGAATAAAAACAGCAATTAACATATACGTGTATATAGTTAGGTACATTTTAAT
TTCACTCGCATAGGTGTAGTATTGGGTAAATGGGATTTTTAAATTTTTCATTCAGTCTTA
TTATTATTATTACGTGTATTAAGCACTTATTATTATCATTATTACTTAGGTATTTATAGC
AGTTAGTGTTGAACAAATTTTCGAGATTCGATGAATGTAAGGCGTGTGTTAAAAGTATTG
TGCATTTAAAATTTATTGAATCGCAACACCATACGCATAAATAATGTACGATAAAAATAT
GACGTGGTCTTTAATATTTTAAAATAAATATTTCTATACATA
(3642 bp)

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