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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24538_c1_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_5-A-like_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.99 TPM:0.91
ORF Entry
Sequence
(Nucleotide)
CGTCAGTCTTTTGTAATGATTTATGAAAGGAAATAATCTAATTACGATCACAGAATTTTC
AAGTGTAGTGCACTATAATAAAGTAAAGAATTTAACATCCGGCCTAAAGTGTTAAGATAC
TAGGGAAGTTACTCGTAATTACGTTACAGCAGGCTACGATGTCTTGGCGAAGTCGAGAGG
AGCGCTGCTCGAGGTGGGACACCAACAAATGGGAACTCCGCGATCGGTCGCCTGTATGGG
AGCCTAGGAACGTCAGCCCTGAGTGCAGGTCGCCATCCCGACACCGACACTCGCATGATA
GACGGCCTCGTCACGAGCGCGACTTTCGGCGTGACCGCCACGATCGGGATCGCGACCGTG
ACCGAGAACGCGACAGAAAACGGTACGAGGAAGCCCCCGCGCCCCCCTCGCCGCCCGTTA
TCAGCGATGACAAAAAAAGCTCACGGTCTAGTAGTAGATCCGATAGTCGTGACAGGGACA
GGTCTGATATGGAAATAGAAAAGGACAAGCACCAGGATGAGGTGCAGAACAACGCATCAC
CGGGTGATTGGATCTGCAAGTGTGGTCTATACAACTTTAAAAGACGTCAGGTCTGTTACC
GTAGAACTTGTAATGGGAAAAGATCGGAGGGTGTAGTTTATGGAGGTGATGGGGATCGTA
ACGGTGTAGTCGAAACACCTGGCATCACAAAGAGGTTACTCTTTAGGAGGCTAGATGCTT
TGACTACTGAAGAAAATATATTGGAAGAGCTCAAACTACGTTGCAGTAAAGAAGTTCTAG
AGTTAATTGTAGGTATTTCAATTGGTAGAGAAACTTTAACAGGTGCATCAAAGTGTCTCG
CCTACATCAATTTCAACTCCATAGCAGATTCTACAACAGCACATACAGAGTTGGTGAATC
TCCAACCACCATTAAGGATTGACGGTCGAGAAGTGCTTATAAGCTTTTACAATGAACCTA
AAAAAATTGTTAAACCAACACAAGTTGACTATACGTCATACTACTCTCAAATGTCTTCGT
ACAGTGGTGCAACAACTCAAGCAATGTCTGAGGCTGATAGAGTCAATGCAGCAGCTGCAG
TAGCTCAGTCTGCTATATCGGCAGCCCAGGCTAGACAGCTATCATGGACGCCAGTTGGTG
CTGTACCTTTCACTGGTACTACCCAAACTACAAAAACAAATGTACCCATAGGTGATGGGA
AGACAGTTTATCCTGCCCCAGATGTGAGAACATTCATGTATGATGAGTCATCTGGTTATT
ATTATGACCCGTCAACTTGTTTATACTATGATGGGAAGACACAATATTTTTATAATAGTC
AAATCAGTCAATATATGTATTGGGATGGTAAAACAAACACTTATGTTGCTGCAACACAGG
CTCAGAATGCTGAACAAAACAAACAAAGAGAGGCCAAGGAGCCTGATGAAAAGAAAAGGA
GAGATAAAGAAGACAAAGTTAAAGTAGCTAAAAAGATAGCTAAAGATATGGAAAGATGGG
CACGGACTCTAAATCAAAAGAAAGAGAATGCTCGGAGTAACTTTGTTATGGAACAACCAA
CTGACACAAGTGCTAGCAAAGGCTCAGCAGACATTGGTTTTTCAGTACTAGGAGCTGGAC
CATCATTAACTCATGTAAGAGAAATATCCCCACCTCCCAACACAGATGAATTCTTGGTCA
AAAAGATCTCAGAACCAGTATTTGATAATGATGATGACATTATTGACTGGGACAAATTAA
CCTGCTTGTTATGCAAAAGGAAATTCCCTTCTGTAGAAGTGTTGAATAAGCATAAAGTTA
TGTCAGACTTGCACAAACAAAATCTAGTTGAATTTAGGAAGAAGAATGACTTGATTCCAC
AGATGAATGGTTATAGAGACAGGGCAGCTGAGCGACGTATGAAATTTGGTGAAGATGAGC
CTCCAATGATAAGAAAACGTTATGAGCCTTCTGAACCAATAGGTCCACCCATTAACCCGC
ACCCACCTCCAAATGTAGTAGATACAATAGGAGGTAAAATGCTGCAAAAAATGGGCTGGT
CGGAAGGTCGAGGTTTAGGTAAGACTGAGCAGGGACGAATAGCTCCCATAGAAGCAGAAC
AGAGGCCAAGTTTAGCTGGTCTGGGGCAGAAAAGAGGTATATACACTCCCACACCTGGTG
AAACATATCGCGATACAGTTAAGAAACTTATGATAGCAAGATATAAGGAAGTTGTTGGAC
AAGAAGAAGGGAAATAGATTCGACCTGGGATTCTACAACGCTCCCGTCACACGCGTATTC
GACAATCGGTGAGTAATTAATATTATAAGTGACCTTTTTCATACAGGTGAATAATTTCTA
TGTGGGAAACGTCGTGATTGCCTTTTTATCGTGAATTTTTACAGCAAAATTTGATGTTGA
CACTTTCGGTAACAACTTATTTATTTTTACATCTTCTTTGTGACTCGGGGAAATAGTACA
AACGTTCCTAGATTAAATTTTTTTTTATGAGAAATTGTCAACATCCTTTCCGATCTCCGA
ATGTTTAAGACACAATGGAAACAGAAGACAAAAAGCGTGAAGAATTGTGACTAGTTTGTG
CAAGGTGTTGTGAACCAAGAGATAACACTGACATTTTTGACAATTTACATTGCAGAGTCT
ACGCGCGAAGCTGGAACCACGTGCCAAACAAAATATTAAAAAGTACTTCATTTTATACTC
GTTGGATCGGAAATGAATTGATCAAACGCCATTTTAAAAATATTTAGCTTTCTTCCGTAG
CGTTTCGTGTATAGTTTAACTTTAATGTATATATATAAAATAATGATGTAGTAAGGAATT
TTGAGATTGCGTTTGATTGTAAATAAAGATAAATATAGGTAGGTTATATTATAAAAACAC
GCTCTAATAGTAAGCCCAAAAATTAAAGTAATATTTTAATTGTAGTGTTTTTCGGGGCAA
GATATTACGCTAAAGTAATGAAACTAATGTATTTTCATTGATGAATGTCAATATTTAAGT
TAATCTGCGTTGATTTTGTGAACATTACGTTGGCTAGGTCGATACGGTCTAGCTAATGAA
AGCCTGTCGAAGATGAGTTCTTGTACAAGATTAAATTAAGCCTAAACATAGGTGTTCATT
TAAGCTAAATTTAATGATGATTATTACAATAAAGACATAAATAATTTACAGAGATTAGTA
TTAAAAGGTAGGTAATCAAGTTGCATAATTGTTGTTAAAATAAATGTATATACATGAAAT
CCTAAACTTTATAGAAGCGCCGAAATGCGCCCTTGTCAGCTGTACGGTAGCATTTTCCCG
TAACTTATAATTTGTACTCAATAAGTGCATACTAGTCGATTGAATTTGCCGTCCTAGTAA
AACATCACAACGACGTCTGTTGATGGATTCTATTCGATAATAAAAGAATGATTTATTTTA
ATAAAAGAATAAAAACAGCAATTAACATATACGTGTATATAGTTAGGTACATTTTAATTT
CACTCGCATAGGTGTAGTATTGGGTAAATGGGATTTTTAAATTTTTCATTCAGTCTTATT
ATTATTATTACGTGTATTAAGCACTTATTATTATCATTATTACTTAGGTATTTATAGCAG
TTAGTGTTGAACAAATTTTCGAGATTCGATGAATGTAAGGCGTGTGTTAAAAGTATTGTG
CATTTAAAATTTATTGAATCGCAACACCATACGCATAAATAATGTACGATAAAAATATGA
CGTGGTCTTTAATATTTTAAAATAAATATTTCTATACATA
(3760 bp)

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