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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24453_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_loquacious_isoform_X5_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0016442 C RISC complex
GO:0030422 P production of siRNA involved in RNA interference
GO:0030423 P targeting of mRNA for destruction involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0035197 F siRNA binding
GO:0035198 F miRNA binding
GO:0035280 P miRNA loading onto RISC involved in gene silencing by miRNA
GO:0042803 F protein homodimerization activity
GO:0046782 P regulation of viral transcription
Transcript
Level		FPKM:9.71 TPM:8.99
ORF Entry
Sequence
(Nucleotide)
GCAACACCAAAAATTTATTGAAGTTACAGCAGAAATAATATGAAGTTCATAATGTTTTAA
AATAATATAGACTTCATACATATTATTAGCAGGTGTGACAAATGTTAAAAAGCCATGATA
TTATTATATTTAGAGCTTAATTATAATTAATAACAATAAGTAAAACCAAGACTCACTAAA
GAAAAAATAAAATAAACGTGGAACAATCAAAGTCCTTACGGCCGGACAAAATATTAGTTT
TTATTTAGTTGGGTCTTGGTTGAACAGAACTCCAATCCTTTACTCGAGTAGTCTTTTCTA
ACTTGAACAGTGCGATGTTTTATAAGGGCAGGTTGAACTCACACCATTCAATTTAAAAGA
AACTTGGTGCGTGCAGGTTCCTCGTCGGTGCCGGGATCACAAACATCGACGACGACACTG
TACAGGTACAAATTGTTACAACCTCTATACTTTGCATTAAAATAATGCCCATTTTCACAG
GCAAGGGATCCTCTCTTTACAAACTCTTTACAGTGAGTGATGCATCTCACTCATACATTT
AGTATTCTACTTCCCTGCAAAGTTTTCCATCATGTACACAAAAGAAAACTCACAATCACT
GGTATCAAACAAAACGAACAACGACATGTAATCCTTCAATACCATCAATGTTCCAACCCT
TGCACTTTGTAAAAAGTTCTTAAAGTTCAAGTGAATTAATTGCTACGTCGGAGCTTATTA
CAAAGCAAAGGTCGGGCAGTTCGTCAACAAGACACTAGCTGAAACTATTTTCCGTTTAAT
GCTCAGCATATTAAAAAGGCTTACCAATGATAGTTAAAATTCATAGTTCCTAAACATGAA
TTTACGAAATAAGTCAAACATACTGACTTCGCCGCAATAATAGTGTTAATTTATAGATAA
AATAGATTAAAAGCTAAGATTGAGATTATACTTTAATAATTAAATATGAATGCAAAAAAC
ATGCCTAAGATGCTGAATATTAAACTGGAAATATATGTAAATCCACACTTTTTTTTGTAT
TTTCATTTTATTTCATTTTTTTTACATTTTTATAACACGTAATTTCCACGCTGGGAAAAT
TACACTAATTCTATGCAAAGTATAGCTTGTATTTTATGACAAATCACTCCATACTTTGTT
TTTTAAGATTACGGGCTATGCAATTTATCCTCGCACATTGGCAGTAGTTTTATTAATAAA
TAATTAACTTTTACTTGCAAATTATTAAAGGATTTAATTTCATCACCATGCTAGTTGCCA
GAGTGACACTTTTTTTACGGCCGTTTCGCTTAAAATCGCTTAAATGTTTATGGCTCTTGG
TGGAAATAAATGTCTGGGGAATACAAAATAAATTGACTGCTAAGAACGGTTTTTAAACTT
CGGTTGATGAGCCTCATATCGCAGCACTTTGTTAACACTTCAGTGAGGAGTTAATTATAG
AATTGAATAGCTATCGCGAAAATTATCTCTTGAAACGGGGGAACAATAACAGAGTTGAAA
ATAGTATCTCAGTGAAGTATATAGGGTCCGGTAACTCCTTAACACAAGATTGGCCATGAG
CTCGTTCACTTATCTTAGCAATAAGTTTCGAACTGCCTACCATAAATTAACCAAAAAATA
ATTAAACAAATTGGTTACTGCAAACATGCCAGTTATAAAGCATAGCCCAAAGTACTATTG
GTACATAGATGCGTACTATTAATGCCATTATTCATATGGAAAGTGATGCAACAATATGAA
GGCTCAAAACCTAACGACATCAATACAAAACACATAGTGATATGGCCTGCATTAAAATTA
AATCTCATAACGTTAGAGCCCATAGATCAAATGCATAGGTCGTCGCACTGGTCTTTGCTG
ATGTCGTAAGATGTTGAAAATTTCACTTTTTGGTCATAATCTTGAGATACTCCAAAGCGT
TCTGAGCAGCAGATGACTGGGCATCCTTGCTGGTGAGGCCGGCTCCATGGCATACAGCTA
CTGGCAATGTGGAAAGCTGGACAAGACACTGACATAGACCAGTCATAGACTTTTCTTCTA
TGTCAACATAGGTCACCTCAAAAGATTGCTCCGATGCTATTTCTTGCAAGAACTGAACGA
AGTTAAAATCCTTATTGTTTAGTGGCGTCACCTGCAACTTGGCCAGGTTGGGGCCAACAG
ACTGTTTGAGATGTTTGTGGAACTGCGACACTTTATGGCTATGGCTCGTGGTCAATGTGG
AGATTTTACTATCTTTCAAATCGGCATAACGGGCCGCAACACCGCCCTCATCATCATTCT
GGAAGGATTCTGGTGGGTTGTCCTGTAAGGCCTGCCACATCTTGTAGGCAGCTTGCCGTT
TAGCTAGTTTCTTTGACTTGCCTGTACCAACTTCACGGCGCTTGAGCAATGTGCAAATGA
TCGTAAATTGACGTTCATGGGGCAAACGTCTATTAACATTGTCATCGTTTTCAGCATGGT
AAGATGGTGGTGGCCAGAATCGTGACATACACAACTCCTGAAGCCACCCAACAGGATTAC
CCATTAGTTTATCTTCAAATGTAGGTACTACAGCACCAGTTTCAGGAACATTGCCATTGG
TAGTCTGATCAGCTGGTGTAGCACCAGTTAACTTGTCCAGTAAAGCTTTGGCTGCAGAGT
GCTTTGCCTCTTTTTTTGAGCGACCAGTGCCCATTGCAACTAAATCGGCCACAGTTACTC
TGTACCGGAAAGTGGGTTCATGTATCATGCCTTCTATCTGGACTAGTTCATATTTAGGAA
CAGTTCCACGACGTGCCAACAGCTCTTGCAAAACAGAGACAGGAGTCTTTGTAGGAAGTG
ATTCCATTTCCCTCTTGGCGGCCTCGTCCAAAGGCAATCTTTGCAAGTTATTAGGTTTGG
GTCGGGTCTGATAGCGGCGTCTTGGACCGTGAGGAATGTGTTCACCGTTCGGTCCACTGC
CGTGCACCGTCATTCCATGGATAACACCGGGTGGTAAGCCCGGGACCACAGATGGATGCG
GGTGGACCGTATTCCCTTCCATTTTTCCCACAGCCGTAGTTACAAATGTATTTATCGAAA
TTTGCTATTGAAAATGAAACGGATACAATATGAAAGATAAAAGAGAACAGAATTAGATCT
TCAGTTTCGTATAACAACCTATGTAACCTACACATTAAATTTATGTGAAG
(3170 bp)

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