| Name | A_BomaMG_comp24428_c1_seq1 |
| Scaffold_id | |
NCBI non-redundant
(nr) | PREDICTED:_pre-mRNA-splicing_factor_ATP-dependent_RNA_helicase_PRP16_[Amyelois_transitella] |
| Ontology |
| GO:0000166 |
F |
nucleotide binding |
| GO:0000398 |
P |
mRNA splicing, via spliceosome |
| GO:0003676 |
F |
nucleic acid binding |
| GO:0004004 |
F |
RNA helicase activity |
| GO:0004386 |
F |
helicase activity |
| GO:0005524 |
F |
ATP binding |
| GO:0005634 |
C |
nucleus |
| GO:0005681 |
C |
spliceosomal complex |
| GO:0005737 |
C |
cytoplasm |
| GO:0006397 |
P |
mRNA processing |
| GO:0008026 |
F |
helicase activity |
| GO:0008380 |
P |
RNA splicing |
| GO:0016787 |
F |
hydrolase activity |
| GO:0044822 |
F |
RNA binding |
|
Transcript
Level | FPKM:2.02 TPM:1.87 |
| ORF Entry | |
Sequence
(Nucleotide) | GCCGCTACAGACCCAGGCGCTGCGGGGTGCGGCGCGGCGTGCCCAGCCCCGGGGTGGCCA
CCTCCTGCTTCACGGGAACGTCTTCGTCTTTCTTCTTGCGATCTTCTGCCATTTTGGCCT
CGGCCTCCTTCATCTCTTCTTCCATGCGTTGGAGGTGGACCGCTGCCTCTTTACGCTTGT
CTCGATTCGATTTGCCGGTCTCCTTGACGGAGAAGAACATGGGCCCCAGCTCGGCCAGCC
AGCGCGCGTCCACGGCGGGGACGCAGTGCATGTACTCGCGCGCCGTCATGGTGAGCTCGT
GGTACACCACGTAGTCGGGGCTGCAGCCCAGCCCGAACAGCGCCGAGGTGGGGTGCAGGT
GGCACGGCATGCCGGTGCGGCAGTTCACGTACTCGCCGATGCCCTTCAGCCGCGCCGCCT
GCTGGAAGTAAGCTGAACAGATGCATTTCCTGACGGTGTCCCAATCGGTGCCGCAGGACA
CGAGCGGCAGGCGCTGCTGCTGCAGAATGTCCTTCAGCTGCTGGCGGACCTCGCGCACCT
TCCTCATCGCCTTCGCGTGAACGAAGTGCTCCGTGCACCACTGACTGGAGTAGTTGTTGG
ATTTCCACTGGTTGTACAAGTGTAGGAGGGTCAGGTGATCGGATTCGGGAACTTGGAATT
TCTCTTTGACTGCGTCGGCTTCTTCCTCGCGACCTTGAGGACGGTAGAAGACTGAAGGCA
CCGACAGCATCGACACGATGATGAGCACCTCGGCGCTGCAGCCCATGTCCGCGGCCACGA
TGAGCATGTGGCACTGCGCCGGGTCCAGCGGGAACTCCGCCATCTGCCGCCCGAGCGCCG
TCAGCGAGCCCGTGCCGTCCAGCGCGCCCAGGATCCACAGCTGGTACATCGAGTTCAGGA
TCGTGTCCTGTGGAGGAGGATCCATGAAGTGGAAAGCCAGTAGGTCTTCAACGCCCAAGG
ACTTGAGCAACAGCACGGTATTGGCCAGGTTCGTCCTCTGTATCTCCGGCACAGTGGACG
CCAGCAGCTCGTGCTGGTACTGCCGCTGCGTGTACAGACAGAAGGCCTTGCCCGGGCCGG
TACGCCCGGCTCGGCCCGCCCGCTGCCGGGCGTTGGCCTGGCTAACCGGATATATCTGCA
AAGCGTCCATACCGATCCTCGGGTTGTAAACCTTCAGCTTGCAATATCCGCAGTCTATGA
CGTACATGATCCCGTCCACGGTCAGTGACGTTTCTGCTATATTGGTGGCGACGATACACT
TCCTCTGTCCGGGCGGCGCTCGCTGGAATATCTTCGCCTGCAAGTCAGCGGGGAGCTGAG
AGTATATCGGCAGGACGGTCAGGGGGGGCGCGTTGTCTAAATCGCCCAGTCTCTCTGTTA
ATACCTCGCACGTAACTTCGATGTCTTCCTGACCAGGCATGAATATCAGAATGTCGCCCT
CGTCTGGCTGTAGATGAATTTGTAAAGCCTGTTTGACAGCTCCGTCAACGTAATCTTCGC
ACGGGTTCTTTGAGAAAAACGTCTCCACGGGGAAGGTCCTGCCGGGGATGGTGAAAGTCG
GCACGTTACCGAAAAACGTCGAGAACTTAGTCGAATCCATCGTGGCTGATGTGACGATCA
ACTTCAGGTCGGAGCGACGAGCTACTACCTCCCGCAGCAGCCCGAAGAGCATGTCGGTGG
ACAGTGAGCGCTCGTGAGCCTCGTCCATGATGATGGCGGAGTAGTTGTCCAGGTCCGGCT
CCCGGAGCCCCTCGCGGAGCAGGATGCCGTCCGTCATGTACTTGATGACCGTGCTCGGGG
ATGTGCAGTCTTCGAACCGTATGGCGTACCCGACCTCGTCACCGAGGCGCGTGTGCATCT
CGTCGGAGACCCGCTTGGCGACGGACATGGCGGCGACGCGGCGCGGCTGCGGGCACCCGA
TCATGCCGAGCCGGGTGGA
(1939 bp) |
