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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24398_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ubiquilin-1-like_[Amyelois_transitella]
Ontology
GO:0000502 C proteasome complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0016235 C aggresome
GO:0016241 P regulation of macroautophagy
GO:0019900 F kinase binding
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031396 P regulation of protein ubiquitination
GO:0031398 P positive regulation of protein ubiquitination
GO:0031410 C cytoplasmic vesicle
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0034140 P negative regulation of toll-like receptor 3 signaling pathway
GO:0034976 P response to endoplasmic reticulum stress
GO:0035973 P aggrephagy
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0048471 C perinuclear region of cytoplasm
GO:0071456 P cellular response to hypoxia
GO:1901097 P negative regulation of autophagosome maturation
GO:1901340 P negative regulation of store-operated calcium channel activity
GO:1902175 P regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
GO:1903071 P positive regulation of ER-associated ubiquitin-dependent protein catabolic process
GO:2000785 P regulation of autophagosome assembly
Transcript
Level		FPKM:26.86 TPM:24.87
ORF Entry
Sequence
(Nucleotide)
ATTCCTTTTGTATTTATTTATAATAGTTGCATTATGTCACAATTACGTTACACCCAGATT
CATTCAAATCAAGACATTTCTAGCAGGCTAGGATACATCACACAGTACATTTCTATTACA
TTGGCGATACTGGTGGACAGATTTAGAAATATCGTTAATTTACTTTTCTATTGATTTTTT
TATTATAAAATAAGGACTTTTACGTGTAGGGAAAGTATGAGAAACTTTTTATTTCTGAAT
AATTATTATTGGTGTTTTATTTTAACAAAGAAACGAAGTTAATTCTTCAGACTTGTACAA
TTGAAAATCAATTCGCTACAAAGTACACTACAAGCGAAATTTTATCATATTATGAATGTT
TCTGATCATAAATATTTTAAAATAAAACAAAGCCTCACCTTTCCAGTCACTTATGAATTT
ATAATTTAATTAGTTAATTGGTACACAGTTTTTGACAGTTTATATAATTTATTGCAATTT
GCTAATATTATATTGCTGAGAAGATACAATTGCTAAGATATTCTAGCCGATTGTTGTGTA
ACAACTATCTGTAACTTCATCATACATACAGTTTACTAAGTTTATTCTATAAAATGCTAT
GTAGTTTTTATAATACCATATGCATGGTAGTGCAAAAGATTTTTCAGTGGAAAAGCAAAC
TATTTACATAAACTTATTCTTAATTTGACGTTTCATAACGCAAATCTACTAAAACGTCCG
TGTTATTAAAATAATGTAACAAAGAAAATAATTAAACTAATTAATAGAAATAGAAATAAA
TTTCTATACAAATACAGTTGTAGTGTACAAAATATTGATTTTATATCATCGCTACGTAAA
ATCAGTGAGTAATGAGTGACTTGTAAACAAAAACTTCTGAATTGTTTACTATCAAAGGAA
TGAATAAAAATTAAATAAAGACACCTTTTACCTTTATTAAGTCTAATTACTACAGTAACA
TACCACAATTTTTAACTACTATCAATCAATTTGGGTACTAGTTTGGAATAAATGAAATTA
AATTAAAATTTGTATTATGAAGCAAAAAAAGGGCAAATATTTCATAAAAACGTTTCCCCC
AAAACCATTATATTTTAATATAAACTTTTTCGTGACCGCTGTCTTTTCAAACACGTTATA
CTAAAGCAATCATACATTAAAAATGTTGCATCAGAGTAGGAATGTAAATTTGGACATCTG
CCTGGACTATTTTAACGCTAAGAAATTGATGACGAATTAGAAATTATTTAAATTTTAACG
TTAAATAATGTGACCATAGGTGTAACAGTCTGAGAACTTTAACAAAAAAAATTACTGTTT
TATTCTACAATTTTTAGGTGTCAAAAATATATGTATTAAAATGATAATGCAAAAAACTGA
ATGATCAACATCTAAATGCAATATTTGTAAAAGACAGTGGCGTTATAGGATGAAACAAAC
GTTATCGCTTTATCGCTGACAGGGCGCGGTAGTGTTAGCTCATGGAGAGCTGACCAAGCG
CCAGTAGCCTCTCCACCGCCGCGTTTACATCCCCAAATGTTGCGATTAGAGCTTGTAAAT
TGGCCTCCCTATTCAGGAAGCCCATGGCGGCCAGTTGCTCTAATTGTTGGGAATAACGTT
GCTCAGGGGGCTGCTGTGTGTTCGTCTGGTTGTTCGACATGGCCGACATCATCCGTTGCA
TAAACTGCGTGAAGAGTTCAGAATTGTTCTGTTGTCGTGCCTGGGCGGGGTTCTGGGCAG
CGCTGGGCGGTTGGGCCGGCGGCGTGGCGGCGGCGGCGCCCACGCCCATGCCCAAGTTGT
TGACAAGGCTGGGCGCCGCTGTACGCAACTGTTCCATGCCTTGTTGTATTTGTAGCAGAG
CATTCAACGCCTGCGGATTAGACATCATCTGTTGCATTTCAGGGTTCTGTAGCTGAGCGA
GAAGTTGCGGCATCATTGTGCGGATTTGGTCTTGAAGTTGCGGATTGTTGGCGAACATTG
GATTCTGATTAATTAGTTGAGATGCCATTTCGGGGTCAGCACTAAGGGCCTGTAACATGG
AGTTGGTGTATGGCGCAGAGAGCATAGACTGGACAAGGCGAGGATTTTCTGACATCTGTT
GCAGAAGAGATTGCATGCCGGGTGTATTGATGAGGCTGGGACCGGAGCCCGAGCCGGCCG
CAGAGGCACTGCCCTGGGAGGCTCCGCCGCCGCCTCCTCCTCCACCACGCTGCCACGGGT
TGGGTAGCGGCTGCCTGTTCTCAGATCCTTGCTGCGGGTTTGTGCCGTCAGAATTGTCTA
CGAGTCCAGAGAAAGGGTTCCCTGCCATGCTACTGGCCACATTGAGCATCGGTTCCTGTA
TGTCCCTGTACATTCTTTGGAGCGCATTGTAACCACCTGGTATACTTTCGAGATTGGAGA
GGGCGCGGTCGTGTGAGCGCATCAACTCTTGCAACATAGCGGGGTTGCGAGCCAACTCCA
TAGTTTGACGTAATAATTCAGGATTGTTTAACATATGACTGATTTCTGGATTTCTAGACA
TGAGATCTTGCATTTGTGGGTTGGAGGTGATGAGGCTACGCATATTCTCAGGATCATTCA
TCATCTGCTGCACCAATGGATTGTCTAAGACTTGTCTGAGCATATCAGGGTTGGACAGAA
GTTCCTGTTGCATTCTAGCCTGGAGATCCATAAAAGTACTCTGACCAAGGCCCAAGCTTT
CAAGACCCGCCAGCCCACCCAGCGAGTTTAAACCAAATGGTGTAGCACTGACGTCAGCTG
GGGGTCTACGAGCCGCACCCTCCGGTTCTGGTCTTGGAGGAGCTTTAATCACTAGATGCA
CTGTCAACCCATCTTTGATGTTGTGTTGCTTCAGGGTATCGGCATCATTCATGATTTTCC
CGGCGAAAATAAGACATAATTGTTCTGGTTCTGTACTGAATTTTGAAGACAACACTTCTT
TGAGTCTTTTGATATCGGCATCTTCCTCAATTTCAACTTGCTGCTTCTCTTTCGGGGTTT
TAACTGTGATCGTAATTTTTTTAGGGTCGTCTTGTCCCTCTGCCATTTTGGCAATTCTAG
AATGACTATGTACTTTGGCGGAAAAGTAAAATTTATACGAGAAAGACAAATTGACGAATA
GCGTTGACTTGTGTATTGTCTATGGGTCA
(3149 bp)

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