SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24329_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		Plectin_[Papilio_machaon]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0008092 F cytoskeletal protein binding
GO:0008307 F structural constituent of muscle
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030506 F ankyrin binding
GO:0031581 P hemidesmosome assembly
GO:0042383 C sarcolemma
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:5.07 TPM:4.69
ORF Entry
Sequence
(Nucleotide)
GCACGAGCTGGACAAACACCAGCGGGAACACAAACTGATCGATCAGTTCCATTCCAAGGT
TGAACAGTGCGTCCACAACCGCTCCAACTTCAGCGGCGAAGAGTTGAATTTGTACAACCA
GCATCTGAGTCAGTTGCAAAAGTTATACGCCGAGCTACTGTCTACTAGTACTAAGCGCAT
GTCGGATTTGGACGCGTTACACGACTTCCTCCAATCAGCGACGGCGGAGTTGAACTGGCT
CAACGAGAAGGAGCAAGTGGAGTTGTCTCGCGACTGGGCCGACCCGCACATCAACCTGCC
CGCCGTTCAGCACTACTACGAGCAACTGATGTCGTCTCTTGAGAAGCGGGAGCTCCAGTT
CAGCAACGTGATCGACCGCGGCGAGGCGCTGATCGCGCAGCACCACCCCGCCACCAAGAC
CATCGAGAGCCACCTGCAGGTGATGCAGTCTCAATGGGCATGGGTCCTCCAGCTGACCCT
CTGCTTGGAGACCCACTTGAAACACACCACGCAGTACCACACCTTCTTCGAGGAGATCAA
AGAGGCGGAGAAATGGATCGCAAAACGCGAGGAAGCACTAAACACGACATTCTCCCAATC
GGAGTTCACCCTGGATCAAGGGGAGAGGCTCCTTAAGGGCATGCAGGACCTTCGGGAGGA
GCTGAACACACACGGAGCCGCCGTGTCGCGGCTGGTCGAGGAGGCGCAGGAAGTCAGGCC
CGTCAAGCTGCGGAGGGCGCCCGTCACCAGACCCATCAGGGCTGAGACCGTGTGCGCGTA
CAAACACGCTAACGTGGCGATCGAGAAGGGCGCGTCGCTGTCGGTGGTGGACAACTCCGG
GCGCAGCCGGTGGCGCGTGCGGCTGGGCGGCGCGGGCTCCGAGGCGC
(887 bp)

- SilkBase 1999-2023 -