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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24260_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		putative_lectin_C-type_domain_containing_protein_[Danaus_plexippus]
Ontology
GO:0000724 P double-strand break repair via homologous recombination
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0004528 F phosphodiesterase I activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008409 F 5'-3' exonuclease activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0017108 F 5'-flap endonuclease activity
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0036297 P interstrand cross-link repair
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0070336 F flap-structured DNA binding
Transcript
Level		FPKM:2.29 TPM:2.12
ORF Entry
Sequence
(Nucleotide)
ATACCGGGCAGGCCATAACTTAAATAATTTATGTATTACATATAAAACCTGTGAATAAAA
TTGAAATTGTGGAAAAAATAATGGAAACAGTTGGAAATTAATACATATGATGACAAATGT
ACTTACATATTGCTTTGTAGAGTTCATAGGAGCACCATGAGCCATCAAACAAGTATTGAT
AAATATTTTAAATCAAAATTGCCCTCTAAAAGTTTCAGTAGCATGAACCAGAATTCCGCA
GGAAGTAAAAAAAGATTTAGTTTGAGTCTCGCAAACGGACCCCCCGTAAAGACACTAAAA
AATGAATATACTAATTCCATAGTAAACATATGTCCAAAAGTGGAGACCTCTTCAAGATTC
TCAAGCCCTGAAAGGGAAAATTACAAAACTGAAACTTTAGTTGATTCCATTAAATCTGAA
ATAAGCCCGACAACGCCACGGAAATCGCCAAAATCATTCGGTTCTCAAGGATCTGGATCA
AAAGATAAATTTTACTCACCAAACAAAAAGCGAGCTGTTTTAAAAAAAAGAAGTCCAGTC
AAAAAGAATTTAGCTCGAGATTCATTTGGATGCTTAGAAAAAGATAACTCAATTGATCAT
GTTTTCAAAGCTGCAAGTGATGGAATGGATGATAAAACTATATTTCTATTGAACATCATC
TATAAGTTTTTGAATAATGAGAATTTGAAGAACCTACTAGATGAATGTTCTCAGACTCTT
TTGAGTAAATGTCTTCATGTGAAAAAGCCTGGTGTCAGAGTTATATGTAGATTGTATTGG
AGGCAGGCCACCATTTACCGCTGGGATGATCTTGAAAATATCAGCAATGATAGGTCTAAT
AAAATTCAAAAACAAATAGTACAAGAAATGATCAGTGATCTAGTAAAAAATGATTTCCTT
GAAAATGTTAATTCTGATGATACATGCAAATTAAATTTTCATGAGATAACTTCTAAATTG
AAAGCTGATGAATTGAAACAAATATGCAAGGAATTAAATATAAAGGTTCAGTCCAAACAA
AGTGCAATAAAATTATTAGAAAATTACAGCAATCAAAGTTCCATCAGCAAGTTCTTTATA
CAAGCAAAAGACAACCCTACCAACAACAAGACCAGACTCTTGGAAATATTAAAAAAAAAA
TTAGGGTCATGCTACAAGTTAACTGAAAAAGCAAGAAGTACACTGTATGAGTTGTATCTA
TTGACATACTTAGGAATGGACTACTCAATTATAAGGGAGAAGAGGCTGGAACTTACATTA
CTGTATGAGAAGATTAATCGTGAGACATTTCCAATTATCGAAAACAGGGATATTGATGAT
GCGAGTGTTGTTTTCAAAAATCGAAAAGAGTTTGAGAAGTATCTAGAAGCTCATTATATA
TACGAAAAGTATATAATCGAGACAGACGATAAAGTCAAATGTAATTTAGTAGAAACGGTA
TATGAAATGTACAAGAAAATTGACAAGGAAGACATGATTAGATACACTTCACTACCGGAG
TGGTTGCGTCGATACACGCCGCCATATATATTTGTGAAAATATTAGGCGAAGGGATCCAG
TCGCTGAAGCGTAATAAAAGTGACGTGTCTTCGAACTTCGCCGTTGAAATACTCAGTGTG
CTGATAGCGCAGGACTCGTTCAGGCAACACAAGAAAGCTGGCTGGTATACCGAAAAAGCT
TTAATACTACAGAAATATCTTGGACGGCACGATGAGGCGGCCCAGTTATTGTTGGAAGGA
CTTCAGTCGAAAAAACTTTCGGACGACGCCAAAGACGCGATGCGACCTCAAGCTGTCAAA
ATATCGAAGCAGAAAACAAATGTAGGAAACAAACTAAGAATAATTCTCAACGAAATCGCC
AATGAAAATATTAAATTGGAAAAGGATTTGAGCGCTGAGCATTTACACAAAAATCCTATG
GATAACTGGTATAAAGGCAAATTGAAGTACGAGGTTTGCATAGATGGGATAAGGCAAGCC
ATTGAGGTTGAAGATTACTGTATCTGGCATTACATTAACAACGGAACGTACACCCACGGT
GATCACTGGGAAGGCAGAATAATCACGACAATATTCTTTCTGCTGTTCTGGGATATCATA
TACTCGAAACCTGCTCACGCACCAGGTATATTCCTCAGTCGCTATCAGAGGTATCCATTG
GACTTGTACTGCGATAGTTTCTACACGAATAGAAAGAGTGAGATCGACGAGCGATTGAGT
AGTCTAGCGGCGGGCAGCGCAGAGGATATGTTGGAGGCCATGAGACGCGTGTGGGACTCG
AGGCCCGAAGGTGAATTATCTGGACTAACGAGGAGTATCGAGTGGGACAGGATAGAGATG
GTGGCGGGTTGCCTCGGGCCGCGGCGGGTGGGGGCGCTGTGCGAGCGACTCGCCACGAAC
TACGGGCACGCGCACAGCGGCTTCCCCGACCTCACGCTGTGGAACGTACACACGAAAACA
ATAACGTTCATGGAGGTGAAGTCTGACTCGGACCGTCCGTCCGTGAAGCAGCTGCAGTGG
ATGCACTACCTGCGGCAGCGCGGGCTCCGCACGGCCTTCTGCTACGTCGGCGGAGACTCC
GGGCGCCGCGCCAGG
(2595 bp)

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