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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24220_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_Tob1_[Amyelois_transitella]
Ontology
GO:0003714 F transcription corepressor activity
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007184 P regulation of SMAD protein signal transduction
GO:0008285 P negative regulation of cell population proliferation
GO:0009967 P positive regulation of signal transduction
GO:0017148 P negative regulation of translation
GO:0030014 C CCR4-NOT complex
GO:0030514 P negative regulation of BMP signaling pathway
GO:0030971 F receptor tyrosine kinase binding
GO:0045668 P negative regulation of osteoblast differentiation
GO:0046332 F SMAD binding
GO:0060212 P negative regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:1900153 P positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:1903507 P negative regulation of nucleic acid-templated transcription
Transcript
Level		FPKM:13.25 TPM:12.26
ORF Entry
Sequence
(Nucleotide)
TCCGGGGCCGGTGACATGGACCGCGCCGCCAGCTGCTGCTGCATCGCGCGCTGCTTTATG
TAATTGCTGAATTCGGTGGGAGACATGCGGTTTGCGCGCTTGCTGCTCGTTTTGAGCTTG
GTGCTGCCAAACTTCGTCTGTGCAAATGTAGCTGTCGTGAAGGTGAGCGGCTGTGCACGG
AACGGAGGCGCAGGAGAGAAGGCCGCGGGCGCTGGCGGTGATGGCGCCGCAGCAGGCTCC
ACTGGCCTGAAGCATTGGGCCTCAGGGTTGAACGCGCGTGTTACCTCCCGATCGGTTCTT
TCATCGGCAGCACGCTCGTCACTGCTGAACAAAACCTTCACAGCGCCCTTTTCTCCGATA
CGGTATGATACTTCACCTGGATCAACCCAGACAGCCAGATCCCTGGGTAGGTGTTCTAGT
ACATCACGTACGGGCACTCCCGATTCCCTCGCCGCCCTTTCAAGCACTGGATCCAATGGG
CCTCCAGTTTTCAGGCATCGGAACGCAGAGCCCCGGCACGGTCTGTCCGGGTACCAATGA
CCCCTGAATTTATCCTTGAGTGCCTTCTCTAATTCTTCCCCGAAGATGTTGACTCGCCGT
CTTGGCAGCTTATTGTATAAGTAAGATATGACGAAGTTTAGGGCGACTTGCACTTCAATA
TGCATTTTTGGGAGCACTAGTGAACAGTCGTATGGAGAAAATCGATGGTGCTTGCCACTC
GGCGACCGGCGGTTGACTAAGCCACTGTGTCAGCAGAACGCGCCCCACCCGAACGTCAGC
CCGCCTGATTCGATGTCACGGTTTGCAATAAAAAAAAAATACTATACACAGTTTACGCAC
TAAAAATATAATTGAAACACTTTAGATTGTGGAATTCAGGCGGCTTGAGTGAGGTTGTGA
TCGCGATCGGCCGCAGCGCGGGTCGACTAGCGCGTCTCGTCGAGTCGCTG
(950 bp)

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