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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24202_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_MARCH6_isoform_X2_[Papilio_xuthus]
Ontology
GO:0000835 C ER ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008270 F zinc ion binding
GO:0010498 P proteasomal protein catabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019899 F enzyme binding
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0036503 P ERAD pathway
GO:0046872 F metal ion binding
GO:0070936 P protein K48-linked ubiquitination
GO:1904264 F ubiquitin protein ligase activity
GO:1990381 F ubiquitin-specific protease binding
Transcript
Level		FPKM:22.23 TPM:20.58
ORF Entry
Sequence
(Nucleotide)
GAAATTGGCAGCACTGGTTGCTGCTGTCAAACAAAGAGAAAATGTAATATGTTCGGTACC
TACCTACCTACTTACAAGTTTTCCTATCTTCGATAAAAAGTGTCGTCAATTTGTGTTTTG
TGTTGTTTTAGAGCTGGGTTTCGCTCTGTGTGGTGTCATAATTATTAGTTACAAACTCAA
TAAATATCTTAATAGAAGAATTCCAAGCACCAGATTTTGTTATTCGACAGTGTTGATCAA
GTCGACAAACTGGATTATAGATAATGATGGACTCGGACTCGTCCGGCGCCGACTTCTGCC
GGTTTTGTCGCTCGGAGGCAACGTCGGATCGGCCTTTATTCCACCCTTGCATATGTACCG
GTTCGATTAAATGGATCCATCAGGAATGCTTGGTACAATGGATGAGATACTCTCGGAAGG
AAATCTGCGAGCTTTGCGGACATCGCTTTTCTTTTATGCCGATATATTCGCCGGACATGC
CTCGCAGGCTGCCTATCCGCGATGTAGTGGGCGGCCTGGTGATGTCCGTTGCGTCAGCCG
TAAAGGACTGGCTCCATTACACCCTGGTGGCTTTAGCCTGGCTCGGTATCGTACCGCTTA
CGGCTTGCAGGACATATAGGTGCTTGTTCTCAGGCTCCCTGGGACCAGTTATTTCCTTAC
CATTTGAGATTGTTTCTGCTGAGAATCTTGCCAAAGATGTTTTCTCAGGATGTTTTATTG
TGACATGTACACTTTTCTCTTTTATTGGACTTGTGTGGTTGAGAGAACAAATAATGCACG
GTGGAGGTCCAGACTGGATGGAAAGAGAAAATATACCAGTTCCCCCACCAGAGGATTTTG
TACAGCCTGAAAATAATAATGAAAGAGTTAATGAAGTTGGAGGGGATGACGGTGGAGCTC
GTGAAGAAGGTAACGGAGTTGGTAACGGTAATGGTGAAGGAGGTGGTGAAGAACCGTTAG
TGGGCGATGAAGCGAATTGGAATCCAATGGAATGGGATAGAGCTGCTGCTGAAGAATTGA
CATGGGCCCGACTATTAGGTCTTGATGGGTCCATGGTCTTTCTAGAGCATGTGTTTTGGG
TGGTATCCCTCAACACTCTGTTTATAGTGGTGTTTGCATTCTGTCCTTATCACATAGGAC
GACTTGGGGCTGCCTTAGCAGGATTAGCAACAGAAGGTCCTTATGCTGGACCTTTGACAG
CACTGGCTGGCTATGTGTTAGTTGGTGCAATACTTGCCGTACTTCATGGCTTAGCTGCTC
TGTTTCGGCTAAGGAGTGCCAAGAAAGCACTAGGATTCTGCTACGTTGTAGTCAAAGTTG
CACTGCTTTCAGTCATGGAGATAGGTGTGATCCCTCTAATATGTGGATGGTGGTTGGATC
TCTGTTCTCTCTCCATGTTTGATGCGACACTCAAAGACCGCGAATCAAGCCTTCAGGCGG
CTCCCTGGACATTGATGTTTATACATTGGCTTGTCGGAATGGTCTATGTGTACTACTTTG
CGTCATTTGTGCTGTTACTAAGGGAAGTGCTGAGACCGGGAGTGTTATGGTTCTTGAAGA
ATCTGAACGATCCTGATTTCAGTCCAGTGCAGGAAATGATTCACTTGTCTGTCATGTGTC
ACATCAGAAGGCTGGTGTTGTCAGCCATGATCTTTGGCTCAGCAGTACTATTCATGCTTT
GGATGCCAATAAGGGTCATTAAATATGTGCTGCCCGGTTTCCTGCCATACACTGTCTCCG
TTCATTCAGAAGCGCCAGTCAATGAATTAAGTTTGGAACTTCTTCTGCTTCAGGTGATCC
TTCCAGCTCTTCTGGAGCAATCTCACACGAGGACGTGGTTAAAGATGGCGGTGCGAACTT
GGTGCGTGTGCGCTTCTGGTCTCCTCGGCTTGAGATCGTATCTGCTTGGCGAGATATCGC
GACAGGCTGATCCTAATCCGCCCCCACATCTGCCTCATCAACTCGGTGTCGCTCATCAAG
CCCTGATGCGTCGCGACGGTCCAGCGGCGGTGGAGCCCTACGTCCGCGTGTCGTGGTTCC
CGCTGAGGTTGGCCGCGCTGCTTGTGCTGGTCTCTATTTCGCTCGTGTTAGCGAGTGCAA
TGACCCTTGTAATTCCAGTAGCAATCGGCAGAAAGGTAATGGCGCTGTGGATGCCTAAGG
CGGCTGAGAGAGTTCACGAACTGTATACCGCTGCATGCGGTATGTACGTGAGCTGGGCGG
CGGGGCGGGCGGGCGTGGCGGCGGT
(2245 bp)

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