SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24133_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_vesicle_transport_protein_SEC20_[Papilio_machaon]
Ontology
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0007029 P endoplasmic reticulum organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0016320 P endoplasmic reticulum membrane fusion
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0031201 C SNARE complex
GO:0043066 P negative regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0097194 P execution phase of apoptosis
Transcript
Level		FPKM:13.28 TPM:12.29
ORF Entry
Sequence
(Nucleotide)
GACAATAGTGAAGTTTATGAATCCGTAAACTCTCTAAAAACAAATAAGATTATGTATTAT
TTAATTTGTAAATTAATATAAATTTTAATGATAATATAGAAAATACACCACAATGGCCCT
CAAAATGGATTTGAGTCCAACGGACCCATATCATCAATCGTTGTTTGCAAAATTAGAAAA
TCCTGATGTGGTCTATCAGAATTTCGTGAAGAGATTGGCTAAGTATCATTTTCAAGTCAA
AGCAATTATCCAGGATATACTGGAATGCAGGGAGTCGATGGAGAAATTAAATGAGTTAAA
TGAAAAAGGAAGGGCAAAAATAACGGAAGTACGAGAGGAATTAGAAAATTTATACCTGTA
TGGTAAAGAAACAGGGGATACAAAATATGATACTGAATTAGAATCACAGAGGCACCTTTT
AGCTTGTCTCCTTAAGGAATTTAAAGATGCCAATATAAATAGTATGTTTGCTATTGAAAA
GGCACAAAGAGAAGATTTATTAAAATGTAGTGAAAATGAGAAGTCATCAGTCCGACAAAG
AAAGAAAAAGATGGATAAGGATGGATTGGTCAAAATGTCATCAGGTGTGACAGAGCAATT
ACTTTCCGTAAGCAGGCAGCTAGCGGACACCACACAAAAGAGTCAAAATACTTTGGATAA
TTTGGTTTCATCTAGTTCAACAGTGCATGGAACACAATCGGAATTGGAAAATACAGCAGG
AACGATTACGCAATCGAGCAAACTACTGAAGAAATACGGACGTAGAGAATTTACGGACAA
AGTGATCATGTTTTTTGCATTTTTATTCTTTTTGGCGGTGTGCCTGTACATTGTACAGAA
GAGGCTTTTTTAATCGTTTGTGACTATAGTTTTGAAATACACGTGTATGCAATTTATTAT
GAATTTGTGAAATAAATGTGTTGTCTAACTTATTCTGTAAAAAAAAAAAAAAAA
(954 bp)

- SilkBase 1999-2023 -