SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24125_c1_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_myosin_heavy_chain,_non-muscle_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0001736 P establishment of planar polarity
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005938 C cell cortex
GO:0006936 P muscle contraction
GO:0007297 P ovarian follicle cell migration
GO:0007298 P border follicle cell migration
GO:0007391 P dorsal closure
GO:0007395 P dorsal closure, spreading of leading edge cells
GO:0007435 P salivary gland morphogenesis
GO:0007443 P Malpighian tubule morphogenesis
GO:0007496 P anterior midgut development
GO:0008152 P metabolic process
GO:0008258 P head involution
GO:0016203 P muscle attachment
GO:0016459 C myosin complex
GO:0016460 C myosin II complex
GO:0016461 C unconventional myosin complex
GO:0022008 P neurogenesis
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031036 P myosin II filament assembly
GO:0031252 C cell leading edge
GO:0032027 F myosin light chain binding
GO:0032154 C cleavage furrow
GO:0032507 P maintenance of protein location in cell
GO:0035017 P cuticle pattern formation
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0035159 P regulation of tube length, open tracheal system
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0035317 P imaginal disc-derived wing hair organization
GO:0042060 P wound healing
GO:0042623 F ATP hydrolysis activity
GO:0044291 C cell-cell contact zone
GO:0045179 C apical cortex
GO:0045200 P establishment of neuroblast polarity
GO:0045214 P sarcomere organization
GO:0046663 P dorsal closure, leading edge cell differentiation
GO:0046664 P dorsal closure, amnioserosa morphology change
GO:0051259 P protein complex oligomerization
GO:0051726 P regulation of cell cycle
GO:0070938 C contractile ring
GO:0070986 P left/right axis specification
GO:0071260 P cellular response to mechanical stimulus
GO:1901739 P regulation of myoblast fusion
Transcript
Level		FPKM:14.89 TPM:13.78
ORF Entry
Sequence
(Nucleotide)
CGCCGCCGCGCAGAAGGCCGCGCGCGAGGCGGAGTCCGCGCTGGCCGACCTGCACGACGA
CCTGGACGCCGAGCGCGCCGCCCGCTCCAAGGCAGAGAAGCTGCGCAGGGACCTCAACGA
GGAGCTCGAGGCGCTCAAGAGCGAGCTGCTGGACTCGCTGGACACCACCGCAGCCCAACA
GGAGCTCCGGTCGAAGCGCGAGCAGGAGGTGGCGGTGCTGAAGCGCAGCCTGGAGGAGGA
GGCGGCGGCGCACGAGGCGGCGCTCACGCAGCAGCGCCACAAGCACTCGCTCGACCTGCA
GGCGCTCAACGAGCAGCAGGAACAACTCAAAAAGGCTAAAGCTGCCCTTGAGAAAGCGAA
GCAGTCGCTGGAAGCGGAGAACGCGGACCTCGCCACGGAACTGAAGTCCGCCAGCGCCGC
CCGCGTCGACGGCGAGAAGAAACGGAAGCAGGCGGAGGCCCAGCTCGCCGACCTCGCCGC
CAAGCTGCAAGACGTGGAGAGGACCAGAGCGGAAGTCCAAGAGAAATGCGTCCGTCTGCA
GAGCGAGGCGGAGCAGGCCGCGGCTCAGCTGGAGGACGCCGAGCTGAAAGCCTCCGCCGC
CGTCAAGCAGGCCGCCACCATCGGCGCGCAGCTCACGGAGGCGCAGGCACTTTTGGAAGA
AGAAACGAAGCAGAAGCTGTCCCTCCAGACGAAGCTCCGCAACATCGAACAAGAGTTGGA
ACAGGCGCGCGATCAGCTCGAAGAAGAAGAGGAGGCTAAGAAAAATCTTGAGAAACAGGT
GACGGCGCTAACGGTTCAAGTGTCCGAGGCGAAGAAGAAAGCGGAGGAGGAAGCTAAGAA
CGCGGCCGCCCTGGAGGAACAGCGCAAGAAGCTCAGCAAGGACGTGGAGGCTCTGCACCG
GCAGATCGACGAGCTGCAGCAGGCCAACGACAAACTAGACAAGAGTAAAAAGAAACTTCA
AGCCGAGCTGGAAGACACTAACATAGAGCTAGAAGCGCAGCGAGCCAAAGTTCTGGAGCT
TGAGAAGAAACAGAAGAGCTTCGACAAGGTGGTGGCTGAAGAAAGAGCCGTGGCGGAACG
GTATGCCGCCGAGAGAGACCAGGCGGAGCACGAGGCCAGGGAGAAGGAGACCAGGGTGCT
CTCTCTGACCAGGGAATTAGATGATGCTGCTGAGAAGATCGAAGAGCTAGAACGGACGAA
GCGAGTGCTCCAAGCCGAGCTGGACGAGCTGGCCAACTCGCAAGGCACGGCCGACAAGAA
CGTCCACGAGCTGGAGCGAGCCAAGCGAGCGCTGGAGTCGCAGCTGGCCGAGCTGCACGC
GCAGAACGAGGAGATCGAGGACGACCTGCAGCTCACCGAGGACGCCAAGCTGCGGCTCGA
GGTCAACATGCAGGCCATGCGCGCGCAGTTCGAGCGAGACCTGCAGGCTAAAGAAGAACA
AGGCGAGGAGAAGCGTCGCGGCATCGTGAAGCAGCTCCGCGACGTGGAGACGGAGCTGGA
GGAGGAGCGCAAGCAGCGAGCCGCCGCGCTCGCGCAGAGGAAAAAGCTCGAGGCTGACCT
CAAGGACGCCGAGCAGGCGCTGCACCTCGCCAACAAGGTCAAAGAAGATGCCGCAAAACA
GGTTAAGAAACTACAGCAGCAGCTCAAGGAAGCCGCCCGCGAGGCCGAAGAAGCCAGAGC
CGGTCGCGAAGAGGCTTCGGCCTCGGCCAGAGAAGCCGAGAGGAAGCTCAAGGCCCTGGA
AGCCGAGGCTCTCCATCACGTCGAAGAGCTGGCGGCCGCTGAGCGAGCGAGACGACAGGC
TGAGGCCGAGAGAGACGACCTGCACGATGAACTCAATAATACCTCCGCTAAGAGTACACT
TCTGATCGATGAGAAGAAACGTCTCGAGGCCAGAATAGCCGCCCTCGAGGAGGACATCGA
CGAAGAACAATCCAACAACGAAATACTTAGCGATAGACTTAGGAAGTCACAGAACCAAAT
CGATACATTAACAATGGAGTTGGGAACAGAGAAATCTGCAACACAGAAGCTGGAGAGCGG
CAAACTCGTCCTCGAGAGGCAGAACAAGGAGCTGAAGGCGAAACTCGCTGAAATGGAGAC
GGCGGGACGGACCAAGACCAAGGGTGTTATTACGTCATTGGAGCTGAAGGTGGCCAACCT
CGAGGAGCAACTGGAGGCGGAGTCGAGAGAGCGTCTCGCTCAACAGAAGGCCTCGAGGAA
ACTCGATAAGAAGATGAAGGAGTTGGCTCTTCAACTCGACGAGGAAAGAAGACAGGCCGA
CCAGTTCAAGGAACAGATTGAAAAGATGAACGTGAGAATGAAAACACTAAAGCGTCGTTT
AGACGAGGCGGAAGAGGAAGTGCAGCGCGAGAGGGCCGGCAAGAGGAAGGCGCAGAGGGA
ACTCGAGGACCTCAACGAGGCTCACGAAACCGTCACCCTCGAGTGCAACAACTTGAGGAA
CAAACTCAGTGGCACCGTCACTACGCCTAAAAGGCTGGCGTCCCTGTGTGACTTCGATGA
GAGCGAATAAACGAGTCCTAAATGCTAGAAGAAGAGGCGACAAGGTGGGCCGATAAGTCT
GTCCAGCGGCTCCACGACCTCGCGCAGGAACCGTCCATCCTTGGCTCCGGGAGGCGGCTC
CGGAGACGAGTCCTTCGATGACGTCAACGATACAACAAACAGCGTCGAGTAACATTAACA
AGTCACTAGCGATGTTCACTTTGAATTTTATTCTTTAACACCCATAGGAATAGAGCTGAG
ATTTCTTTGTAAGGTAAACCTTAGGCTTAGGCCTTTGTATGGCACACATTCGTATTTCGA
AATTATTGTTGGTAACGGTGTTGCTAACGTTAGAAATCGAAGCGTTATCGCAATATTTTT
GTTAGAATTAAATGATAGAAATTCAAGTAGACATCGCATTCGGACAGTAAGTTTAACTCT
ACAGCTTCGCATTCTGTTTTGCCTTTGATAATTGTTATGTATACAGATTGTAGTAATAAA
TGTTACAATAATATTTTATGGTGTTAAATTTTAATGTCTACATATTATGTATGTACGGGG
CATATTTCCGCCGATGTTGTTCACTCGGCCAAGCAAATAAAGTTCTTAGTCGATCAGAAG
ACAGATTGTGACTGATTTTCAAGACAATATGGCCGCCTGACAAATTATAATGCTGACAAA
TATTATTGTACCTTTTTAGAACGCGCTGTATTTACGCGTACATTTTATAAGTATTGTAAT
TTAAAGAAATGTAGATAGGCACACTAGAGGCGGCCTAAGTTTTTAACGAATATATTCGGC
TCTCTGTCACCCTTGCGATCAGAGCGCGAGTGCGACAGAGACGTGCATAGCTGCATTTTA
ACCTCTTGCTTAGATACCGGTGCTCAATTTAATCTAAAAACAATGCATTTAAACAGTCTT
ATGTATCTTTTTGGTACTTTCCCACAACTATTTTGATATCCCCAATTGCGCATCCAGTAT
TATATGATACATTCCTTGATAAATCGAAGTATACCTTCATGTTTACCCAGATTCGATCGA
AAATAACATTGGTGATAGTTTTTTTTTTTTTAAATGTAAACAAAGAGTATTATTGTTTTG
TGGCAAAAGTACATAAATCATGTTATAAGAAAATAAGCAAAATAGTGCATTTAAAAAAAG
CGACTGAGCAACGAAGACTGTTTTTGAGGGAATCGTTTTTTGAGACACTTAATTCGAAAT
TTGTACAACGTTAAATTTATATTAATATTTTTTACTACCGTCAAATTGAGTGTGATGGAT
AACACTGTTTCCGGATCGAACCCGCGATCCGTTGGTCTGCCACGACGCTCGCCTCGCGTG
TCGTCCCGCGCTACATGTAAATAAAATCAGTGCGAACACTGAGCGCTTAGTTGCCATAAA
ATTTTACGATTTAGTTTTAAGTAACACGAAACATTTAGCCTTTTTGATGCATACGTGACG
GTTCTGAACTTTATCATCTACACAGTAAGTACGAGAATAGCTTGACGTGTGTTAACTGTC
GCGTATCGCTATTTTTGTAAACGTATTTCACTCAAAATGTAACGTTTTTAAAGAACAAAA
CGTGTAAATACGCCATTGTTTTTGGTGGTTTTTTTTTAAAAATACAATGCTGTTTCGATT
GTTGCCAACCGAAAAAATAAAGCGACAGACACGGCTCACGAACATAGACGTTTAATATTA
AGAACGTAGGAATAAATTGTGGCCTTAAGTTTTTTTTTTTATATGGACAATACGTAAATC
GGAACGTTATCGCCCTCTGTTGGCGCTAAATACGAGTGTAACTTTGTAATGAGCATTTTA
ACAATGTCTATCAACGTCTATTTATCTACCTATCCAATTTTTTATTTTTATTTTATTTAA
TAAATATAGTTTTTTTCTTTTCCCGATATAATAATATAAATTCTAAATGTAAGTGAACCA
TTGAAGCATAAACATATTTTACATAAATATTATATTTAATTATTAACAATATTGATGTAA
TTGTAAAATTGGTCATAGGTTGTAACAAGTTATAAGTTGGTATGCCAATTAAACAATTTT
TCATAATTTTTAAAAAAAA
(4579 bp)

- SilkBase 1999-2023 -