SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24078_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_dystroglycan_isoform_X4_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0043236 F laminin binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
Transcript
Level		FPKM:16.49 TPM:15.27
ORF Entry
Sequence
(Nucleotide)
GGGCGGGGGTGTGCGCCGCGCCGCCCGCCACCCGCGCGCCCGACACCTACCCGCCCGTCA
CTCGCAACCAAGTCGACCACATCACTGCCTCCGCCGGACACCTGCTCGTCTACAAGGTGC
CCGAGGACACATTCTTCGACCCAGAAGACGGAGGCACCCGTAACCTCATACTGTCGCTGC
GGTACAGCGACCGCACCGAGATCCCGGCCGGGCACTGGCTACAGTTTGACGCCAATAACC
AGGAGTTCTACGGCTTGCCCACCACTACGGACGAGGGCAGCGTTTCTTATCAACTGATTG
CTGAAGACTCCAGCAAGAAAACTGCGTATGACAGTCTAATAGTGGAGGTCGTGAAGGCGC
CTCCCATCCGACCCACGGTCGAGTTCCAGATGACCTTGGAGTATCCGTTCTTGAAGCTCG
CCTTCAACGCTAAAAACAAGCGTAAAGTTGTCGAGAAGCTCGCCAACCTGTTCGGACAAA
AGGAGACTGATAATATTAGGATACAAAGCATCACCAATAATCCTACCTCCATTATATGGT
ACAACACCAGCTTGCCAATGGACAGATGCCCGAAGGCCGAAATCGAGCAGCTCCGCAAGA
TGATCATCGTAGACGATCGCGGCTCTAGAGGCGGCGCTCTCCGCGAAAACGTCGATCAAG
TCTTCGATAAGGACTTCAAAGTGATGTCGATAACGCTGAACCCGCTCGGCCTGTGCGCGG
AGCAGAACACAAAAGTATCCAAGGTTCCGCCGGCGCTGTACCCCGGCGCGCCCAACTCGC
AGAACAGCAAGACGGGCAGCGCCGCGGAGCAGAGCTACCTCGTGACGTTCATCATCCCGG
CCGTGGTCATCGTGTGCATGATACTGCTGGCCGGCGTCATCGCCTGCGTGCTGTACCGGA
GGCGGCGGACAGGTAAAATGAGTGTCGGCGACGAGGAGGAGCGACAAGCGTTCCGTTCGA
AGGGCATACCCGTTATATTTCAAGACGAATTAGAAGAACGTACAGACACCGAACCTATAC
ACAAAAGTCCTGTTATAATGCGCGAAGAGAAGCCGCCATTGTTGCCGCCCGCACCGGACT
ACAGATCGGGCGAGGATGCCCCGTACCGTCCGCCGCCGCCATTCGCCGCGTCCCGCACTC
CGCCGCGACCCAAAGCCACACCTACCTACAGAAAACCTCCGCCATACGTGCCCCCATAAA
ATCACTCCACCGCCATCTCTTAGCTCGTAGTGTAGCCGCGTTCCAATTATTATTATTAAG
GGTCGCCGCACACGGGCCATCGGCCACAACCACAAAAGCCGCCCCGGCATCTTTCCTGTA
TTTTTTATACATTTCATATGTAGCGTGTGGCGAGTCCGTATAAAATGTATGAAAACAACA
GGAAACAGGTCGGTAGCTGCTTTTTGTGGTTGTGGCTGGTGGCCCGTGTGCGGCGACACT
AATGACTCTTCCATATCTGCGCGACGAAGCTTCGATTTATTTGCGAATTCAACTAAACTC
TGCAAACTGTTAATTCAGTGATCGTTTGTTACGTGACGCTAATGCCCTCTCCCTGTCTCG
CTCGCTCCGTCGCTTCGAACGCAGATGTGGCTGAGACAACATCCTGAATCAAATGCGTCG
TTAAAATCCTATGAGAGCTTATCGAATCACATTGGAACCGGTGCGGTAATCATCATTGAA
ATTGTTTAAGACCCGCTAGTCGAAGCAATTGAAGTCATTCAATACATTAATAATTTGAAT
CGATTAAAATTCTGTAATTAGCGTTAATCTTTTGAAATTGCATTTATATTAAATTAGTAA
GGGAACTCATATCGTTAAAACAAGGAATTGTGAGCAGTTTTTTTTTTTTTTTTCATATAT
TACGAATTTCTTATACAAAAGTTATATTCACGAATTAGATCGACAGTAGTTGTAACGTTG
TGATGTTTCAGTGTTTTCACGCTGAGTATTTCGATATATATATAAATAAACGGTAGTGGT
ATTTGTTGGAGTAGACAATGTTACGTTAGCTCCTAGAATAAGGCACGGTTCCGACAAATC
GACTATTTAATACGTACTCGTAATGCGAATATGGATTGTGGTACCAAATATTTTAAACTT
GCACTGCCTAGAGTACATGCGTGACTGTGTCAATTACAATAAGCGAAACGACTTATTTAT
TTACTATTCGATTGGAATGACAATGAATTAGTGTATTTGGCTGATCGAGTGCCATTGTTT
CGAGAGTTGTTTTTTTTTAATTAAAATTAAAAAACATATCGGAATGTAACGTTTTAGCCT
TTAGCGTAGATCTTCCATAAACTATGTTGATATATCAGTAGAGTTTGCATTAATACGGGA
CTACGTTATCGAATTTTACATTGTGATAACGAGTCCTTATGAAATGATTTGTCGTGAATA
CGCTATATACAATGCATGGGTTGTTCAATATTAGATGGTTTGTACACTATGGAATACAAT
TAACTTAATATTATAATAAAATATACAACTGACTTTAGTTTTAGGTTACTAGTAGATATT
TTTAAGGATGAAATATCATTTTGTACTTGTCTAATTATTACCATAGATGTAAGGTTAACA
AATTGTATAAACTATAGGCAACTATCGAACGAAATGAGCTGATTTTTCTCTTATTTTTTC
TTTGGATGTATTTTTATTTGTACTCTGTACTCGTTTAGAGTTTGGCATTTATAGATCTTT
TTAGTGTTTACATTATGTATACAATTATATGGATCGGCTTAAATCGATTTTTTTTTCTTA
TGTAGATGTACTTAATATTGTCCACTAAAACCGTACCATTTTCATTATTTTATAGCTATG
TACCCTCGATATATTTTTGTTTCATGCTATTTTCCATTATACGCACATGATTTATATAAT
TAATGAGCTTTTAATTTAAATAAAAATTAATAACTTTGTACTTCTTTTAATCCACAA
(2937 bp)

- SilkBase 1999-2023 -