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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23996_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_THO_complex_subunit_2_isoform_X2_[Bombyx_mori]
Ontology
GO:0000346 C transcription export complex
GO:0000347 C THO complex
GO:0000445 C THO complex part of transcription export complex
GO:0000784 C chromosome, telomeric region
GO:0000902 P cell morphogenesis
GO:0001824 P blastocyst development
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0010793 P regulation of mRNA export from nucleus
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0017145 P stem cell division
GO:0046784 P viral mRNA export from host cell nucleus
GO:0048666 P neuron development
GO:0048699 P generation of neurons
GO:0051028 P mRNA transport
Transcript
Level		FPKM:2.38 TPM:2.21
ORF Entry
Sequence
(Nucleotide)
ATCGCTTAATTTTATACAATTATGTCTTTAGATAATTCAATATTGTCAGCTAAGGTTGGC
TTTTCTCCAATTGTCCAACGATTGCATATCATGGCAGGCAGCTTCTATCTTCTTATCTTG
GATTCATTAGTGCGCCTATGTTTATCTCTGGCTTCTTCGTGGGAACGGTCACGGAATGGT
GATTTCTCCCTTTTGTATTTGTCGTAATGGTGATCTTCTTGAGAACCATTCTGATGACCG
CTCATCTTGATTGCTCCTTTTTGTTCGTCTCGGCGTCTCTTTTGTTCTAAAATTGTAGAT
TCCTCAGCTCTGTCCCTCTTGCGGTTCATCTTACGCTCTTTGCGTTCATCACCTCTAACT
TTAGTCTTCCTTTTTTCCTTTTCAGGAGATCGCTCTTCTAATTCTTTGCTAGCCTGCTTA
CGTAGAAAAATGTTTAAATCTCTGAGCAAAGTGTCAAACAACATAATTCGTGTGAACGAT
TCCAAATAAATACATCTACGGACCGTAAGACAAAAGGCTCACCGAATGAAGACCAACATC
AAGAAATTACTCATTTAAAAAAATCGTCTTCAATGTAACTTAAATTTCAGTTTTTTAGTT
CTTCGGGTTACATTTTCAATGTGATGTCTCTTGCCTCGTACTTTCTTCTTTTGAAGGAGT
AACTTCAACTTTATCATGTTTCAATACTTTTCTTCAGTTGCAATTTTTTCTTATCTGTCC
TTTCATTATTCATTAGAATTGTTTAGACAAGCTCTTCGTTATTATTTTGTAGTATGAAAG
ATATTTCAAAGAATAGAGGACTACAGAATATATTTGTTTGTTTGATCTGTGTTTTCTTAA
TTTTGAAATGTACATTTTTATTTTCACTGTGTTGATAATTATTGTTTTACAGCTCATTTT
GTGTTTGTTTTTTTCATTGCTCCGTTTTCTGTTGTTTTATGTTTCTTCGTTCTTGCATAC
TTCAACATCTTCATTGATCTATTTTTAAAGGTGATGGTTCTCCAATGGTTGGTAATTTAT
TGTTTAAATAATATTCCTTGAAAGTTGGATTAGTGAGAATTTTTGTTTAACATTGGTTAG
TAGACGAAAGTTTACAGTATTATTAGTTTCTTCGGAAATTGGTATGTGGAGCTTTGGTCT
TGTTGAAACAACCTGAAGTTTGCACGATCTTGCAGATATAACTGTCCGAGTTGCTTGACT
GAAACTGGGCTTACGAACCGCCTGCCTATTGCAAGTTTCTTCATTAATATCGTTTGAATA
TTCTATTACTGCTTGTGGTTAATTTGTTTCAATAACTCTTCAGCAGATTTCGTCGAATTC
ACCGTTATTTTATTTTCACCAATTTGTTCCTCATTTATTTGAAGATTGAGTAAGTTTATT
GGCAACGTTACGCAAAGTTGTACTTAATTCAGTGAACCTTTTGACTTACGCAGATGTCGT
CTGATGAATACCTCATCATGATGCAGGGACTGGGCTTAATGGACTTACGACTCACAACTT
TACGGCTTCACTTTGTATTTGAATTGTTCATTAGCGATTTTCCGGGTGTTAGTTTATTCA
CACTGGTGAGCTGCTCTTAAATTCTTTGAATCACACGGGTCCATCGAGGTAGCCACGCTG
CCGCTCGTTTAGTTGTCTTCGATGCCTCAAACCGTTCCAAGAGCAATGCTTCGGTGTTGT
GTAGCTAGCTGACTGCGTGTTGTCACCATTATTAACAATTTGAAGATAAATGACGAACAA
ACTTGACGATAATTTCATTTATTTTTCGCTTTGAATTCTTCAAGCCGCCAAAATATTAAT
TGTAGGCAGAGTATTATGTAATTCAGTTTCATCACAATTGCTTGTTTCCGCTATTTAGAA
ATTCTTCGTTTTTCAAGAGATTTATTTGGTTTAGTTTTTAAATCGATTTCTATTACTTAA
TTTGGTTGTTTTATTATTATATTGTGCACTTTAAAAGTCTTAAATGTATCACTTGTTTCT
CCTTTAATATTGATTGTCTTGAATTGTTATTGATTGTTGTTAGATAATTTCAGTCTGGTT
TGTGGTCGAGGTCCAGCCCAATCCTCAGTCCGGGACGTGCACGATGCAAGGCCGGTTTAT
TATCACAATACTCACCTTGCCGTTACTGCTGTTTTCAACTTTACGTCGCTTTATATCTCG
TTCGACATCATCTGAAGTGCTTCGATGTTCGTGTGGCGGTGAGATTGCTTCTAAATAATT
GCTTTCCCTCTGTAAACGTTCTTTGGGTGATCTATCTTTAATTCGGGTTTCTTCTTTGGA
CCTTTCCTTTGTGGAGGTTTTTGATTCTCTTTTGGAATCTTTATCTCGGTCCGCTTCGTC
TCGGCGGCGGTCGCTATTGCGCGAGTCCCGTTTTTCACTTTCTTGTGGTGGGGGCGCGGG
TGCGGGGGCGGGTTCAGGATCTGCGACCATTTCTTCTTTGGCGGGCGCAGCGCTGGCGGC
CGCGTTGCTCGCCGCTTTGTGCTTGTCGCTCATCTGATGGAAATCAGCTTCATTCATCAT
ATTCGAGGACTTGTTCCGTAGCTGTCCACTGTAGACCGTTGCTAACACATAAAGATCTTG
TCTTTGTATTTTCTCTTGTTCCTTAACCTTATCAATTTTCTTTTCGATTATTTGACTTAG
CTTAGCCAGAACAGGAAAATGAGGTAAGACTCTTATTAGAACTATGAGGGCGTTACGTAT
TTGCACGTAGTCGCCTGAATCCAAGCAAACAACCATGGCTTTGGTTATTTTATAATGCCA
TTTGTGGCACACGTGCCTGTAGTTTTCATATCCGACATGGTCATTAGCTTCAGTGAACTG
CTTGGAGACGCGGTACTTGGTGACGAACCCGGGGTAGTGCGCGCACTCTCGGTGGAAGGC
GTCCTTGTCGGCGTGCCAGCGCATGGCGGTCGTCAGCACCTTGCAGAGGAACGTGCCGTA
CCGCGCCGCCTCCGCCTCCGTGCAAGACATCACCGAGTACGTGATGTCGCAAAACAACCT
ATCATAACACAGAAGAGTGGAGAAATTGGGAGTCTTAAGAGAGTGCACAGTATGCACGAA
CTCGGCGCAGTAGAGCGCGTCGGCCGCCGTGAAGACGCAGCGCGGGAATATGCACAGCTG
CATGAGCCGCGTCACGGTCTCGTTCTTGGCGGAGCGGACCGCCCGCGCCGGGAACCAGT
(3179 bp)

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