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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23986_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nesprin-1-like_isoform_X3_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
Transcript
Level		FPKM:8.60 TPM:7.96
ORF Entry
Sequence
(Nucleotide)
CGCGGACGTCCTGTCGCGAGGACGCTTTCGCCGATCACATGAAAACGCGAACAAATAAAA
CGAACAATACCGAAAAAACACTCGAATACTAAATGAAAAACGATTAACATTATAATGGCG
CGTTAATTTTTGTGCAAAAATCCGCGTACTCTCCTATAAGTATATATCTCGTAAAATAAC
AAGGTCAGGTTGTGTGGTGGAAACAAACTTATTCGTCGTATGCATAATTTTATTTGAAAA
TTAAGACGATTAAACTTTGTTTATACAGTAATAGCCCTGACCTTAGAACACGATCGTGAC
TATTATCAAAAATCAATTCTGAAATTTTTTTACGAATTAGGTTCATCAGAAACTGAATGA
CATCAGGTGTAACAAAGAGTCTGTATTTAAAATAATAATAGTAATATAAAAGTCAAATCA
AAAATACCCTCAAATTACCATGACAATTAACAGTTCAAAACTAAAAACTCGTGAATCGAA
ACACCGCTAATCACTTGTGATATTTTATAACTGTCCTTGTCAAATGTGTGATATGATTTT
GTTTTTTCTTTATTATTATGGTGATGCGATAAGAAATATGTGTCAGTGGCTCGCTGTGTG
ATTTATTATACGAAAATGTCACTTCAAGAGGCATGCTTGGAACAAGAAGCCAGGGTAGCT
GAACTCCGATCGTTGGCGGCGAGAGTCGCTGCGGAAACTGGGTCTAGGGCTCTCCAGGCC
GACGCTGACGCACTGGCCCGAAGGCTGCAGCTGGTCGCCGGCGCTGTCCAGGTCCTGGCG
GATCTGGGCGAAGCCCGGCAGAGCGCACGAGCTAAAGCGCAGCACGCCAAAGAGAAACTA
TGTGACATGAGACAGGACTTGGCTCCGCTGCACGAAGACGGAGAAATCGTTGAAGACAAA
CTGATAGCGTTACGAGAAAACCTTATCGCGCTGGGTAAGAGTGAAGCGGACATCGCTCCA
GCCACGGCGGAACTGCCCGACATCGATAGAGACGTTTCCGAAGAACATTCGATCGTTAGG
ATCTTGGAACTATGGCAGGCTATGTTCAGAGACACATTCTTGCATTACCACAGGCTATCG
ACCGCCCTGGTTAGGTCTGGTGATGCGGCCACTGCGCTCAGACTATGGCACGAGTACTTG
ATCGACTTACAGTCGTTCTTGTCAAGCGGAGTTCCAACAGATTACGAAAACCTAACTGAG
CACAAACGTCTGTGCAGGGTCCACAGAAATCTACTCACTTCGCAACGCTCGGTCCTAATA
AACGAAAACAGGGATACTAAGAATAAGGACTTGGCCGACAAATTCGACACCCTTACTAAT
CTCCACAATGAAACCCTAGCGAGAATTGTCGAAAGACACGATGAAGTGTGCGCCCGCATC
GGAGCCTGGGACGACTATAGAGAGAATTACACAGAACTATTGAGATGGCTTAAAGAAATG
GAACGCGAAAAAGAAAAGCTGCAACTCAGATACGTTCACATGAAAAGGATACACAAGATC
TTATCCAAAATACAGAATCTCGCTGACAAAGTGCCCGAGGGCCGCAAACAGTCTGATAAA
CTTCTATGCAATCTCAAGAAAGTATTACAGTTTACCGAGGAGGCTTATGGGGCCTCCGTC
AAAATGGAATACGCCGGGAGTGTGAAGAGAGTCGAAAACTTGCAAGCTAGCCTCGACACA
TGGAGAGACTTCTTAACTCGAATTCTAGGCCTGATCGGTGAATACGAACGCTTGACTAGT
GATTTACACAAAATGTACTCAAAGACACAAGACGACATTAGTTCATATACTGACGAGGAG
AAATTATCCCGACCGCAACTCAAGAAAATTATTGATAAATATACAGATTTACGGACAAAG
ATTGAAAAGAGCGAAACGCAGATTGAGGCTTTGAGCGTCATCCAGGAACAGTTGAAAGAA
TGCTTGAGCCCGCAGGATATGAGAATAGTGAACCAAAGAATATGGCAACTGAGGCAACAA
CGCGCTGACCTTGAACATCAACTATCTATCATCATTCACAGACTTCAAGAACGACTGGAA
ATCTACGCCATATTTGACACGCGATTCAAACGATTCACAGAATGGATGACAACTGTCGAA
AAACGTATAGAGACTTCGGGCAGTAGCAGCAGCGACATCACCGCTTTAGATCCTCACGAT
TTGATCAGAAGGCTGAACGCTGATGTTCAAGCAGAAACTGCTATGAAGGAACGTGAATTT
GAATGGCTCTCTGAAACCGGTAGTTCTCTTATAGAGCTAGCAAAGAAAGAGGAAAAGTCA
TATAGCAAAAATACATCAAAGCAGTTGAAGGACATGGAAGAAAAATGGCGAAAACTCCAG
GAAACCGGTAGATCTAGAATTGTGAAAATTACTGAATTATTAGAAACTATAACACAGCTC
GAAGAGAGGCTTACAGAAATCAGAATAAAACTACACGTCATAGAGTCGAAATTGACAACG
ACTGTTGTCTTAGAATACCTAACGACAAAGAGCGTGGATGAGAAATTCAAAGAACGAGAT
GATACACATAAAGAAATTGAAGCCGAAAGTGGAGAGGTGTGTGAAACTTTGAATCTCTGC
GATCTTGTGTTCAACGACCCCGATGTTCTCAAAGGTAACTTCGATCTCAGAAACTTAAGA
ACCGGAGTGGACATCGTCGAAAAGAAATGGAAAAATATTTGCGACACTTCTGAACATCGC
AAGAATACGCTGAAAGAAATTCGTAAATCTGCCGAACTATCTTCGTCTGTTCTACCTAAA
TTCGTCAAGAAACTCGATTCAATCGAGAAGAGAGTTGAGAAAATTGAAACCAGAAAACAG
CGTGGTGAACATGAAGATGAAACGGTTTCGAAAGCCGTGATTAAAGACTTGGAAGCATTA
GAACCCAACCTCAAGCGGTTAGAGGACGCATACAGCCGCGTGGCGTCTGCAAGAGGCGTA
GAGCTTCGTGGCCAAGGGGCAGATGAAGCTGCGAAGATGCGGTCGGCGATCCGTCGCTGG
CAACAGCTCAGGGGCAGGGTAGACGCCGCTGGCGCAGACGTCTACAGACAGTTCGTGGCG
GCACACGGAAAAGCAGTCGTCGCGTTGGCTGAAGTCGACGTCAGACTGACCCGAGCTCTG
CATCTTGCTCCCACTCCCTTGGACAAAGAAGCCACCTTAAAAGAGCTAGAGTTGGTTGAA
AAAGAACTGGCTGAATGTCAAGCATTAGTGGATGACGCCGATCGCTTGGCTGCTAAGGTC
TCGACAGCGCAAGGCGTTTCTGAAATGGTTGCAGAGTACCGCGCCTTATATGCGGATGTC
AGGTTGCGACTGGACCTGGCCAGAGCAGAGGTCGTCGGCGACGTGGACACTGCCGTTCAA
GTTGACACTTTAAAATGGGAGACGGACGCAGCCCTACAAGTAGACACCCTCACCTCGAAG
GAGACGTACCGAGCTGAACTGGCGTCGGCCGTGAGGGACACCTCGGAGGCGCTCGAAGTG
CTGGAACTCGCGTTGCAGCAGCAGCTCAAAGACAACGCTGGAAGCGACGAACTGGCCGCG
GCCGCAAAAGAAATCGCCAAAGCCGGAGCCAAGCCCGGACAGACCTTAGAGCTGGCCAAG
CACCTCTCGGAGCTGCTGCTGACCGAGTGCGACGCGACTGAGGACGAAGCCATGATGAAG
GAAGTTGAGTCTCTCTCGTTGCGGTACGAAGACCTGTTGACGCAAGCCAAGAAGAGGGAG
CTCCAAATCAACAACCTGAGGTTGCCCCACTCCGCGTCATACGCGCTCACGTGCGAACAC
GAGTCTGGTAGGCTGACCTGCCCGCTGTGCTCGGAGCGGAACTGGAAGCAGCTGGACAAC
GACCTCTGGCGGCTGGAGCAGTGGCTGCAGTTCGCCGAGGCCACGGAAGCTTCCAGAACC
GAGCCTCCCGAACAATACGACTTACTCGAAGACGCTATACAGGACCACCGCGAGTTCCTG
CTGGACCTGGACTCGCACAAGTCTATCGTGGTGTCGCTGAACGTGGTCGGCGGGCACGTG
GCGGCGCATGCGCACGACGCTCGTGACGCG
(4050 bp)

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