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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23936_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_DNA_topoisomerase_I,_mitochondrial_[Bombyx_mori]
Ontology
GO:0002168 P instar larval development
GO:0003677 F DNA binding
GO:0003916 F DNA topoisomerase activity
GO:0003917 F DNA topoisomerase type I (single strand cut, ATP-independent) activity
GO:0003918 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0005719 C euchromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006265 P DNA topological change
GO:0006338 P chromatin remodeling
GO:0007059 P chromosome segregation
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0016853 F isomerase activity
GO:0030261 P chromosome condensation
GO:0031298 C replication fork protection complex
GO:0045995 P regulation of embryonic development
GO:0048477 P oogenesis
Transcript
Level		FPKM:14.53 TPM:13.46
ORF Entry
Sequence
(Nucleotide)
GCTCGTTTTCGGCCGGCCTCATGTAATCTTATTCGAACAAACGTTGTGATACGTAGGCAA
AATGAGTGTCGAAAACCCGGCCAGCGATAATGATTGTGAATCTGGAAAGGTAAATGGAAA
TAAAAATGAACACGTGAACGGCATGCATAACGGCTACAGTAGCTCTGACAAACACAAATC
AAGCCACAAATCTTCTAGCAAAGACAAGCATCGCGACAAAGATCGCGATCACAAGGGCTC
GTCCAAGCACAGCAGCTCTAGCAGAGACAAGGACAAAGACAAACACTCAAGCAGTAAAGA
GCACAGCAGCTCCCATAAATCTTCCAGCAAAGATAAAGAACACAACAGTGAAAAGAGAGA
CAGAAGTGATAAAGATCACAGTAGCAGAGATAAAGAACGTAGTGACAAAGATAAACACCG
CAGTGACAAGGACAAACATAGAGAAAAATCAAAAAGTGACAAAGATAGGCGTGATGAAAA
AGACAAGAATAAAAGCAGTTCAGATAGCAAAAAGACATCATCATCATCATCCAGAAATAA
AGAACACAAAAGCTCATCAAAGGATAAAGATCATAAATCTAAAAGTAAAGATGAAAAAGA
TAAAGATCGACACAGGAATGACAAGGATAAACACCATAGGGACAAAGATAAGCACTCCAG
TTCAAAAGATAAAAACAGCTCCAGCAAGAACAAGGAGAAAAGTTCAAGTGAAAGAAATGA
AAAGATAAAATCTGAGTCTCAGAATGTCATAAAAGATGAACCAATGGAGGTGGATCAACC
AGTCTTAAAACGTGAACAAGATGATAGTGATGAAGGATATGCTGGAGCTAACACAACTGT
CTCATCTTGTGACTACTCTATGTCCCAATTTAAAGATGAGCCACTTTCTGAACTGCCTCC
AGATGATGAAAGTGAAGAGGATATACCACTAACTGCACGAAAAGCTAAAAAACGCCATGT
TAGTGATGGTGAAGAAGACATTCCATTACTACAAAGAAAGAAATCTAAGAAAAAAGTAAA
AAAAGAAGAGACTTATGAAGATTATGATGATTATGAAGAAGATGAAAAACCTAAAAAGAA
AAAGAAGAGTTCTGAAAAAACTAAATCAGTTAAGGTGAAATCTGAGCCCATAGATGATGG
TATCAGTCCCAATAAACGGAAGAAAAAACAAGACACAGAAACAGAACAAGTCTGGAAATG
GTGGGAAGAAGAGAAGACCGATAATGGAACAAAATGGACATTTTTGGAACATAAAGGCCC
TGTGTTTGCTCCACCTTATGAACCTTTGCCTTCCAATGTCAAATTTTATTATGATGGTAA
AGAGTTGAAACTATCTGAAGATGCTGAAGAAGTAGCAGGATTTTATGCACGCATGTTGGA
CCATGATTATACCACCAAGTCTGTTTTCAACACCAATTTTTTCACTGACTGGCGGAAAGT
GATGACTCCGGAAGAAGCTAAACTTATTAAAGATTTGTCCAAATGTAACTTCAAAGAGAT
GCATGCATACTTTCAGAGTGTATCTGAAAAAAATAGAAATCGATCTAAAGAAGAAAAGGC
TGCTTTAAAAGCCAAAAATGAAGAAATACAAAAGGAATATGGATTTTGCACAATAGATGG
TCATAAAGAGAAGATAGGGAACTTCCGAATAGAACCCCCAGGGTTGTTTAGAGGTCGGGG
TGAGCACCCAAAAATGGGGAAATTAAAGAGACGTGTTATGCCTGAAGATGTCTTGATCAA
TTGCTCAAAAGATAGTAAAATACCAAAACCACCTTCAGGACATAAATGGAGAGAAGTAAG
ACATGATAATACAGTTACATGGTTAGCCTCTTGGACAGAGAATGTTCAGCAGCAAGCTAA
GTATGTCATGTTAAATCCCAGTTCAAAATTGAAGGGTGAAAAAGATTGGCAGAAATATGA
GACTGCTAGAAAACTTCATAAGTGTATAGACAAAATTAGAGAAAATTACCGTGCTGATTG
GAAGGCAAAGGAGATGCAGGTGCGCCAAAGAGCAGTGGCACTATACTTCATTGATCGATT
AGCACTTAGAGCAGGTAATGAAAAAGATGATGAACAAGCTGACACTGTTGGTTGCTGTTC
ATTAAGAGTAGAACATATCCAGTTACACAAAGAAAAGGACGGTAAAGAATATGTAGTAGT
GTTTGATTTCCTTGGTAAAGATTCAATAAGATATTACAATGAAGTGCCAGTAGAGAAACG
TGTATTTAAGAATCTCGAAATATTTATTGAGAATAAAAAGGACAGTGATGATCTCTTCGA
CAGACTTAACACACAAACTTTAAATGAACATTTAAAGGACTTGATGCCAGGTTTGACTGC
CAAGGTATTCCGTACATACAATGCTTCTATTACCCTACAGAAACAATTAGATGAGCTCAC
TGATGGTGATGCCTCTGTGCCTGAGAAGATTTTAGCTTACAATAGAGCAAACCGTGCAGT
TGCCATCTTGTGCAACCATCAACGTGCTGTACCTAAGGGACATTCTAAGTCCATGGAGGC
TTTAAAAGAAAAAATTCAAGCTAAACGGGATCAAATTGATGAGGCTGAAGAAGACCTTCG
ACAAGCATCTAAAGCAGCAAAGCGAGGTTCTGTTAAAGAAAAATTAGCATGTGACAAGAA
GAAAAAGGCACTTGAACGTCTCAAAGACCAACTTAAAAAACTGGAACTGCAGGAAACAGA
CAGAGATGAAAATAAAACCATTGCCCTTGGAACATCGAAACTGAATTATTTGGATCCACG
GATTTCAGTAGCGTGGTGCAAGAAACATGGTGTTCCAATTGAGAAAATATATAACAAAAC
GCAAAGGGATAAGTTCCGATGGGCAATAGACATGGCCGGGCCAGACTATGTCTTCTAGTT
TCAATTTTAGAATAATTAGCAGCTCTATTTTTATATGTTGAATATAACGTCCCAATTATA
CAAAATGATGTATAAAATCAGTTTTATGAACTTACATTTTACAAAGTTCACTATGTGATG
ATGTATTTAAGGTTCAAGTAAAGTTTATGTATTAAAAAATCCGAACATTGTTCCTCCTTT
TTTAAATTAGAAGTCTGATTCTAATTATTTTATTTAGTTTGGACTTTAGTTCTCGATCCC
TTTTTAGGTTATTTAGACTAATATGATAGTTCAAGGAATTCTAGTTTTAAGATTTTGTGT
AAGACTTGCAACTTGGTCAAAAATTTGTTCTCATTTACAAAATAAAATTTAGCTAGCCAT
AATGATAGTATTATCTGAAAATAATTCTTATAATTAAATTACAAGTTGCTAGTCAGTTTT
ATAAAGAATGACAAAATGTTGTGAATAAGTCATTGTGATGTGTAAATACACATTGTAAAT
ATTAGTGAGGCTCATAGTTCACTAAAGTTCAAATGCATAAATAATAATGTTGAATGTGCT
TGTGAAAATACTATTCGGTATTGTGAATAGTGAAGAAAACTTAACTAAGGCTAATTTAAA
AGAATATTGTATCGAAAAGCAAATGATGTTAGAAAACACTGCAGTGGTGAATCATGTAAA
ATAAAATAAAATGTAATGGTTACTTTATTTTTATAAAACAAAAAGCAATAGCTATATAAG
ATTATGAAAGGTACAATTCTGTAGTGTGTTATATGTTCATCTTGTAAATATTAAATTTTT
ACCATGTCATAAAATTGTGAAATGAGATTATCCTAAATAAAAACAGTGA
(3709 bp)

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