SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23866_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		autophagy_related_protein_Atg3-like_protein_[Bombyx_mori]
Ontology
GO:0000045 P autophagosome assembly
GO:0000153 C cytoplasmic ubiquitin ligase complex
GO:0000422 P autophagy of mitochondrion
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006914 P autophagy
GO:0015031 P protein transport
GO:0016874 F ligase activity
GO:0019776 F Atg8 ligase activity
GO:0019777 F Atg12 transferase activity
GO:0043653 P mitochondrial fragmentation involved in apoptotic process
GO:0044804 P autophagy of nucleus
Transcript
Level		FPKM:6.21 TPM:5.75
ORF Entry
Sequence
(Nucleotide)
GCATTATTGAACTTGTCGATTTTAAAGAAAGAACAAAAATAAGACATGTATTTATGAATG
AGCTGTAGAGGGTATTTACATATTTACTTATACATACAAATTTCATAACAGATCGATAGA
AACACGTAGTATAAAGAAAATGAATGTTTTCCTCGCCCAATTCTTTTAATTCAATTTAGA
TACTGTTTAATTTGCTGGTAACATTTAAAAGAAACAATAAAACAATTTTTAGAGAATGAT
GGATTGTGTTTTTGAACAGAGTTACACATTGGACGAGAGAAATATTTATTTCCAACCTTA
TAACAAAATAAATCAGTAAAGTGTTGTATATTTACAAAACATTGCAGCATGATAAGCCAA
TATAATATATCATTTTGTGTTTACAAACTTCAGGTGTTCATATTAAAACTAAAAGTCTTA
CTTAGCGTCTTCAAACATTTAACACCATCGGGACCACAGACAATTGTGCTCTACAAGCGC
TGCTATCTTTGTACCGTAAAAAGCTGAACCATAAACAATATGCTTAAAGTTAATTAATCG
AGAAATTCTGTGTGAAATCATATTCGATGGTGGGTATAACTGTTTGTACGAACTTCAGGA
ATACTATGAGGTAGGAGTGGACGCCCATCTCGCCGCCGCTCTCCGTTACCGTCTCTATTA
TCTTCTTCATGACGTCCGCGTGCCTGCAAGGGTGTACGGACGCCATGCTGGGTCCGGAGA
GATGAGGGTGAGATTCCATCGTGACAGTCTTTTTAGCGTGATCCTGGGACACATCTTCGT
ACATCTGCTCCACAGTCAGTAGTGACCGGTTCTCATCATATCCGATGAGCCATAGCCTTG
GAGTTTGGTAATACTTGTCATAAGTGATGTGTAGGTCGTAAGTTCGAGTCCGGACGATCT
CATCACCTTCTCCTTGCTTCTGTTTCTTATCAGCTTTGAGTTTTAGCTCCGTACGCTGGG
CTAGATCTGTTGATGGATCTACTTCATCTAAAAGACCAGATTCTTGGAACTGCTCCATGT
CCTCAGCCTCGCCCTCATCATCTTCGTCTTCATCATCATCACCACCGTCGGCAGCTCCAT
CGTCACTGTCGCCAGTGTCAGCTGCTTCGAGGGTCATCTCACAGACCTTTTCCTCGAGTG
CAGGGGAGCCTGCATTGTCATAGTGATGAGTATCAACCCAGCCACCATCTGCATCATTTT
CATCTTCTATCACTTTCTCTTTATCTTCACAGTATTCAATTTGTTTACATCGTCTGTAGC
ATGGCACATTTCGAGTTATAAGGAATTGTTTGTCTGCAGGAAGGTAAGGCCTAATCTTAG
CTTCCTCTCCCTTTGCCCACTGCCAGGTAGGGCAGTGGTGTACCAGGTGGTCACCAGCAG
CCACAAACTCTTCAGGAGTCAGTACACCAGTTTCTTGAAATTTCGATTCCTTCAACACCG
GTGTCAAGTAACCGGCCACGCCAAGGGCAGTTCCCTTTACTGTGTTTATTACACTTTGCA
TTGTGATGTACCTAATAAGATTAAGGGTTGTTAAAAAAAACTATGAGCTGTCTTTTACAC
TATTTACTACGTATACCTAGCAATTGCCGGCCAACAAAAGAACTCTCTAATATATTAAGT
GTATA
(1625 bp)

- SilkBase 1999-2023 -