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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23844_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101739826_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030014 C CCR4-NOT complex
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
Transcript
Level		FPKM:11.04 TPM:10.22
ORF Entry
Sequence
(Nucleotide)
TGCGGCCGGGGCAGCGCGTAGGGCGGCAGCGCGCCGAACGCCGGCACCATGCTGGGGCTC
CGGTGGTAATTAGCACCTAATAGTTCACTAGCGGATTCCATTCCTATACTGGAGGCGGGC
ATGTAATGCTTAGGCTCGACCATGACGTTGTGTTGCCGCGCCAGCAGCTCCCTCTGCCGC
AGCAGCATGTCGCTCTGCTCTCGTTCCCTCAACAGCATCTCCTTCTGGTCCAGCAAACCC
TGGTTCATTTGACTAATTGGCCTATCGTTAACGTAACTAATATCTCTGTCCAGTAACCCG
TAGCCGTTGAGCACGGGCCCCTTGAGCTGCGGCAACAGGTGACCGCCGTCGACGAGCCCG
GCCAGCATGTCTCGGTGCCTCTGCATCATGAGGACGTCGCCGGCGTCGTTGAGCAAGTCG
TGGGTGTCGTCGTCCAGCAGGCTGTGGTCGCTGCTCTCCAGCAGGTCGTGGGTCTCCAGC
AGGCTATGTCGATCCGATTCTAATTCGTCCAGGTCATTGGAGATGTAGTTGTGTTGCGAG
TCTGTCTCGAAGACGGAGGAGTGCGGGCGCGGCGCGTCGTCCGCGGGTCCGGTGTCGGTG
CTGTGGCTGGGCTTGTGTTTGGACTTTTCGTTTTTGCTTTTCTTTGTGTGTGTGCTCGTG
CCGTTCGTGTCTTTATTTCTCGTTCTGTTTGTGTCGGTGTGTGTCTCTTTAACGTTTCTC
GTTTGTGCCTGCTGCTGTGCCGTGTCCGTGTGCAGTTCCGTGGGACTGGACGACCCTGAT
ATGCCGTTTTCTTGTGACTTAACGTGTAATTGTTGTGGTTTCGGACTCGTTTGTTTTCTG
GCGGGACTATCTGAAGGAGGGGAGGACCCGAGGCTGGGCCAGGCTTCCTTCCCGTTGGCA
CTGCTACCGCTACTACTGCTGCTGCTATCACTGCTGTCGCTCCTGCTACTGCTACTGCTG
CTCGAACTGGTACTGCCATTCGCACATTCCTCTTTAGATTTAGAATTGACTACGTTGTTT
ATATGTGACGATGTGACCACTGTCGTCGGTATATAGTTCGATTGATTACCATCTTTTGAA
CCGCTCTTTTCTGCATTCGTACTAGAATTACCTGAACCGTTAAGATGCTTGTCCTCGTTG
TTTTTATCCCGTTGCTGCGAGGCGAGCAGCTGATTGTGCAGCTTCCTCTCGTAGACCTGA
TGCAGGCCGGCGTGCATTTCTTCCTTCGTGAAGGACGCCTTCGGATCACCTAGGTCGTGC
AGGTACATACAGTCGGGCTTGGGACAGGGCTGGTTCTTCATGAAGTTGGCGCAGTACTTG
GTGGTGCCGAGCGAGCCCTTCAGCACTCTTCCGTCGAGCGTCACGTTGTTGACGCCCTGG
ATGGCACGCAGCGCGTCCGCCGACGACACGTACGTCACGTACGCCGACGCGGACGGACCC
TGTGACCCTGCATATGTCGTACTTTGGTTTATAACTACTTTGTGAATTTTGCCATACTTT
CCAAAGTACTCTTGCCGTTTTAAAATCTCCGGGTCTGCGAGTCTGACGGGTAGGCCCACG
ACGAACACGAGGTTGTTCTGTACGACGCGAACGTTCGCGAGCGCACGCCGCGACTCTAGC
GTCTTGTTGCGACGTTTCTGCTCGCGGGCTTTCTTCTCCGTCTTTATCGCTGCCACCTGC
TCTTGACTGAGAGGAATGAAGTCTGCCGGGTTTTCTGGGTATGCCTTCCGACAAGCTGGG
CAAAGGCCGTTCTCGCCTTCCCGAATACGATTCCAGCAAAACCGACATATTTGGTATCCA
CATGTACACGGGTAGAAGTGGAGGTCGTCCACTTCCAAGGGTTCCATACATAGTGGACAT
TCCACCTGTTCTTCTCCACTCTGATTCAGCACTGACATCCTAGACCCGAGAGCCAATGGT
TCCAACTTGCCTATAGCAATGAAACAAAGTCAGCTTTTTCTTAATTGACAACCTTACGTC
TCCTCTCAAAGCAAATCTTTTTTCTATTGCAGAACTAAGACTGCTATCCCTTCCGCTAGA
GAAGAAGATTAATCCTTTCCAAAGGACCCGTAAGGAGCTTCAATGCTCAATTTAAAATAA
AATGCAAAGCTGAAATAAATATAACTGTTTTTGAAGATATTTTCTGCGAGTTACTATACA
TTTGTTTTATGAAATGGCCTAATCTTTTACAAGATTCGTTCTGTGATTCCATAGACAATC
TCACTCACCTTTTAATTTTAA
(2241 bp)

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