SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23841_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		ubiquitin_conjugating_enzyme_isoform_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0044257 P cellular protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070062 C extracellular exosome
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
Transcript
Level		FPKM:20.76 TPM:19.22
ORF Entry
Sequence
(Nucleotide)
TAGTAACTCATATGTTTCACAACCTGCTCAAAACTCTGCCAGCCATCTTTTGTCGAAAAA
TCATTTGTTTCGTGTCTTCAGGGTAAATTTCACAATTGTAATTAATGTCAGAGCCACAGT
CTTCGCTTTTATTAAAAAAGCAATTAGCTGAACTGAACAAAAACCCAGTAGAAGGCTTTT
CTGCTGGCTTAATAGATGACAATGATATATACAAATGGGAAGTTCTCATTATTGGTCCCC
CAGACACACTATACGAGGGAGGTTTCTTTAAAGCACATTTAAATTTTCCCAAGGAATATC
CTTTGAGACCACCCCGGATGAAATTTGTGACTGAAATATGGCATCCAAATATTGATAAAA
ATGGTGATGTCTGCATATCAATACTCCACGAGCCAGGTGATGACAAATGGGGTTATGAAA
AAGCTTCAGAACGATGGTTACCTGTGCACACAGTTGAGACTATACTGATCAGTGTCATTT
CAATGCTTGCTGATCCAAATGACGAGAGTCCCGCTAATGTTGATGCTGCAAAAGAATGGA
GAGAACGATATTCGGAATTCAAAAAGAAAGTTGCCAGATGTGTTAGGAAAAGTCAAGAAG
ATTGCTTCTAGGAGCAAAAGGATATTTAGAAAAGAATATATATATTGCTGAAAAAGGGCC
ATTGTGACACCGGCAAACATTTTACTACAAACACTGAAAAACGTTATACATTTGGCATCG
CCGTACGCATCCCCTTACACCAAATCCGCACACGTCCACAGCTGATGTGTTTGCTTATTC
TGTTTCATTTTTGCAGAAAGAGTGGAGAGAATCCTATTCGGAGTTTAAAAGGAAAGTAGC
ACAGTGTGTGAGAAAGAGCCAAGAGGATTGTTCCTAATAACAGTGCCCTTTTTCATAATT
TGTTTGGATTGTGAGAGTGATTGGTGAGATGTGGTTAGGACGCTGAGCGGACGCCCCCGC
CTGGCCCAGAGACTATATTCAAATTGATTTAAAATAAATACTTATAATAATGAGATGGTA
TCGCTGCCGTATTTTATAAATAAAATAGAATTGAAGGTCTTTTTTTCATCTTTTTTAAGA
CATGTTAGTTAGCAATTGTTATAATGATGAAATGTGTAAGGTAATTTTATAGAAAAATAA
ATCTGCATTTTTTTCTTCGTAATCCCCCCCTATATTGTCTGCTTTGAAGTATGATCTCTA
TATGATAAAAACCAAATTTCAAAATGTTTTTTTATGTATTCAAAGTATGAAAATAGCAGC
TTTAAAGAATGTGCATAATACATTTAAATTATTGGTTACTGAAGAGCTTGTATTCAATAA
TCATTGTTCGTGCTTTACGAACCCAAATTAATGTAGTGCTGATTTTATAATCCACATGAA
TACCTAATACTTTCATTAAATAAAAACTACTTTCTGTAAAAATTGTATCAATTTCACTTT
GCCTTAATGCAATGAAGTAGGTTTTTTTAAATCATTAAGCTTTTGAGTTTTGTATCTTGT
TTCAAAGAGTTGAGATGGTGTCTTAAACATACGCTTTATATAAAATCAATACATATTGTT
ACCGAGATAAATACATATATAGTGAGAAATGCATAGTGATGAACCCCTATTTTGGTCTAC
ATCATGATCGTTGATTTGTAATGTGTGTATACTGTTTCTCTGTATGTATATTTTTTGCTA
TAAAATCAATGCAGTGAAA
(1699 bp)

- SilkBase 1999-2023 -