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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23825_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_synaptobrevin_homolog_YKT6_[Amyelois_transitella]
Ontology
GO:0000139 C Golgi membrane
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006903 P vesicle targeting
GO:0006904 P vesicle docking involved in exocytosis
GO:0006906 P vesicle fusion
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0016740 F transferase activity
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0030659 C cytoplasmic vesicle membrane
GO:0031201 C SNARE complex
GO:0031410 C cytoplasmic vesicle
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043025 C neuronal cell body
GO:0070062 C extracellular exosome
GO:0097440 C apical dendrite
GO:0097441 C basal dendrite
Transcript
Level		FPKM:6.09 TPM:5.64
ORF Entry
Sequence
(Nucleotide)
GCTTAGATGGGTGGACGTGCTCACGGCAGAAATAGGTGGGACGATGGTACCTACCAGTGC
AGACTCACAAGACGCACTATCACCAGTAAAAGGTTCACCGGTGAGCATCATGTCCTGAAT
GAAAATACTCGATTTTTCATGTGGCGTTCAACGTGTTAACGAGAAAGCAATATAAAAGAT
TCAGTGTCTTACATGAGCACAAAAATATCACGTGTTAACGTTGCCATTCAGGCAACTGAG
GCAATACTAAATGATAATATTCAACTGTTTATAACATAGTAAATATGATACTATAGTTAG
GTACATTTGTTCCTGTTGTTTACTATTATTTTAATAGCAAATGCTAGCTACATGCCTTTG
ATAATATCTATATATTGCTACTAAGATGGCAATGAAAGCAGACATGATCATCACGATTTT
ATCCCATTGCATTATACTGAATTTGTTTCAGACACTGTTATGTAATGCATCCATCATGTC
TAATCTTAAACGTGATTATGACCGACACCACTACATGGGCTATGAATAAACTTAGATTGT
GACTGAATGAATAGTGCCCCAGACTCACTAGATCAAAGTTGTTTAACAGTTGTGATGCAA
TTGAAGAACTGAATATTTTCAAAATATTAAACATTATCAATGCAATGTCTTTATATTTGC
ACATAATAAATAATATGCATATAAACAAGCCTGCTGATAATGAATTTCTTAATTAAGAGC
AGAACAGATCATTCTTGCCTGTTTAAATTAATGTCACGAATTCAACTCTTGAATGGCAAT
TTTCTCCTTCTAATGGCTAGCTATTATCGGAATATTGTTACATCATGCCAACAGTTCAGA
TCAATTTTGCAAACTACTTCAACTTGTATAATATAATCGAATTTGATAAACTGCATCATT
TGATCAAATTTTTCTTTAATAACTGGCCTATACATTACCATTAATAATTTTTTCATACAT
AGATATATTTATTTTTTAACAACAACATCATTTTTGAGGAATGCAATAAGAAGACTTCAT
AATTCATAATTCTAACATTTTTCTCTGAATTGTTAAACTTCTATTCCTATTTAACCATTT
ATCAAATAAAGCTCACATTTAAATTTTAGTAAAAACCATGAAATTAGTCACTTTCACAAT
CTTTCTTTTCTAAACTGTTATTGCAAATGTTTTGTGCATGGTTTTTTGTACATTATTGCA
ATGAAATCACACGATGCTTAACCCATTTATTAGACCTTATCCCAATACTGTAAGACGACA
TTCATTGTGATGATGAAAATAATTCAAAATGTCTGCATCTGGACTTGTTTAACAATTGCA
ATTAAGACCAAAAATTTAATTAGTTAAGAATTCAATTATACTACAGTAATCTGCAACAGA
ATAACAAGTTACAACATATGTACACTTGGTACCTTAGAGTTATTTTCAGGATATACTATA
CTACTTTGGAATAATCAATTTTAATTAGTATGACATGATGACCCATTTGTAGTTTAAACA
TTAAACTCACTGCTCTTAAATTACTCAATAATATAAATAATAATATTATAATGTTAATAA
TTATGTTGCTCTCCAATTCTAACAAACCCAAAAGTCTTCTACTGATATTTTTTTTCATGG
CTCTTAGCCATAATTGTATGATTTAGAGTTACAATCATAATTTACGACACAAACGTAATC
TCAAGAGGTAATAAAATAAATTATCCCTCTAAAATTTTTAAAATTTAGGAAACAAACTTT
CAGACAAACCTAAAAGGAAATTCCTTAAGGAAAAGATGATGATTCAATATTTGTTTGAAC
TTGTAATTCGATGGGTCAGGATAATTCTTCAAGCCTTTACTAAATTTGTTTTAGTATTTG
TGGCTAGTTGCCACTCTCTTAGTGACAGGTTACAGATTAATCAGAGATACAATTATATTT
TATAATCCCTAAAAGCTATATCAAACCTAATATAATTTTTCGATATAGTACATAGCATTC
AGCAACTATCAACAATACTACAATAGTTATGGCCATTTTTGTTAACAGTTAATCATAATA
AGATACTGTTCAAAAATTACAACAACTGTTAGTTTTTGCTGCAGTCTTATAAAATGCTTT
ACTGTGCATCGACAGGCTGTCTGACTTAGCAACCAAATCATCTAATTTCTCACCTCTCTC
AAGTACAGCTTTTATTGTATCATGTAAAATAATTTTCGTTTCATCCAGATCATTTTGAAT
TTTCGTCAATGCATCAGCTTCTTTGGGATTTTGGTATTTTTCTAAATGTAAAGCCAATGA
CGGAAAATCAATTGTTGATTCTTTACCCGTAGCCCAAGTGCTTGATGGAACTGCAGCTGT
AAACTCATCAAGAGTTTTAGTGATCAAAGTGTGTGCTACTCTGTTAGGATACTCGTGATC
GGATATCAATACTCCAGCTAAATTATCTGCACGCACATACACTTGCAACATATACTCTCC
TTCCTTAACTGACTGCCTTGATGCTGGATGTGTCCTCTCTACCATAGTTTTACTAACAAA
AGTCATAAATTCTTGCACTGAACTTCTTTGAAAATAACTAAAACTCCGAAGATCATAAGC
ACCTTTCAGAATGGATGCATTATTAATCCCTTTGTACAATACAAGTAGTGCATAAACTTT
CACCATTTTTGTTAGATAATTTTTATCGCTCGGTCTCCAAGATTCAATAGCTCGTCGTTT
AATTCGTCGTAAATGAGCCTTCTGAATGAATTTTATGTTTGTACAATCTTGGACGTGCTA
CAATATTAGATTACCCGAAATCAGACAAAAGTCTTAAAATTATTTTAATACATTTGTAAG
ATAATTTTTCTTCGTGAAATCGTAAAAAGTGATTTTTTTACTATTTGGCCTTGGATAATT
GTCTTAAACGTCTTAATGCCTACGTCATGTTTTT
(2914 bp)

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