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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23808_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pre-rRNA_processing_protein_FTSJ3_[Papilio_machaon]
Ontology
GO:0000453 P enzyme-directed rRNA 2'-O-methylation
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0001510 P RNA methylation
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0008650 F rRNA (uridine-2'-O-)-methyltransferase activity
GO:0016435 F rRNA (guanine) methyltransferase activity
GO:0016740 F transferase activity
GO:0030687 C preribosome, large subunit precursor
GO:0030688 C preribosome, small subunit precursor
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
Transcript
Level		FPKM:6.94 TPM:6.42
ORF Entry
Sequence
(Nucleotide)
GGTCACTTTGCTTTTCCTTTCTTTTTGGGGACTTTTTTAGGCTTGTTTTGTTTCTTGGGT
TGTTTTTTACCTCGACCTTTTGTTTTCTCCTTTGCCTTTTGGGCACGTAAGTCCTTTTTC
ATGCGGGGGTCTACCACTTTGTACTGACCCTTAACGCCCTGTGGTCTCTTCATACGCTTA
GCAGTTGTATGTTTCTTGGCCACCACATAAGTGATTTTCTTTTTACCATCAGATTGTGCC
TTCTTGTAAAGTTGTCTCACTTGTTGTGCTTTCTCTCGCTCGGACATATCAGCGTTCTCC
ATTACCGCCTCGACTTTTTTCTTTGCACGTTCCATCTTTTTGATCAAGCGCTTCTTCTTC
CGCGCTTTGGCTTCAATCACCTTCTTGATAGGCTTCACATTGATGTCTTGTAATCTATTC
TTGTATTCATCAGTATACTTCTCCGGTATCACAATGTCTTTCTTCATATGTTTCTTTTCA
TCTTCCATAAACCAATCTGGTAAGTTTTTATCGTTAAACGCGTATCTATTCCACGCGTCA
TCAATTAAATCCCTCTTGAATTTTTTTGATGTAGCTATCATGGTTCCTAAAGCAAGTGTC
TCTGCGTCCATTTTCAAAGTTTTCTTTAGTTTTTTCAGTTCTGGATCTTGGGAGACAACT
TCAAAACCTTCTTTGCCGGCTTTTGGCCCAGCGCTAGAAGCACTGGGAGTAACGTTTTCT
TCAACATCATAATCACTGTCAGAGGAATCATCATCTGAACTCTCGTTGTCTGACAATTTT
CTTTTTAGTGCACTGGTTTGTTTACTTGACTCCACATCTTCAATGACTTTCTTCCCTTTT
TCCTTGAATGTTTCTGTTAACTTGTCCAAATCTATACCTTCATCAGCTTCTTCATCAATA
TTTTTAAAAGAATCTTTCTCGAACCATAGCTGAGCTTTCATAGTCCTCTTCGAAACTGGG
TCAGTGTTGTCCAGATCAGTGAGCAATGGGTTATTCTTTGGAATAGACTGTAATCTATTC
AATTTGTTTGCTGGACTCACTTGACTGTTTTTTAGAGTATTCAATTTAGTTAATTTTTTG
ATTTTTTTCGATTCATTGTCTGAGTCTGAGAAGGCTAATGACTCTTTTTCCTGTTCAGAT
TCTGAATCAGATTCCATTTCAATTTCACTGTCTGAATCTTTGTAATAAAGTCCTGATGAA
TCGAGCTTGGATTCCTCAACATCGTATTTCAAGTACTTTGGCTTAAGTTGAATCTCATCA
TCAAAAGCATCATCTCCATCAACCACTGTGTCAGGCTGCTGATCTATAAGCGTGTTCAGT
TCCTCTGCATTCTTGATATCAGAGAGTTGAAACATATCATTACTTTCCAAAATAGGACCA
TCATCTCCTTTCAATACCATCTTAAGATTCATTTTTTCAGCTAGTTTTTGTCTCTGTTTA
TTCAACTGCTTCCTTTTACGTTTCAATTGTCGCTTCTCTTCATCCTGCAGTTCTGCAATT
TGTGTGTCCACATCACCTTCTTCAGTATCAGCATCCTCATTTGTTTCATGTTCTTCGTTT
TTATCATTGGTTTGGGGCTCATCATCTTTTTTCTCCTTAGACGATTTATATTCTTTCATT
TGCTTGAACCATGACAGCAGAGATTTTAAGTCTTTTCGTCCAAGCACCTTAATATCCTTA
CAACATTCCTTTATTTCTGGTGTTGTCTTTGGATGAGTTTCTATTTCCTTATCATCGAAA
ACAATCTCAGAGCAACCATGAAGTAGATCTACTGGATCATCTTTTCCCAAAAATTCAGAC
AGTTTTACTTTATGATGTGTGGTATAATCATTTTCTTTATATCCTTCTGCTTTTGCTTTT
TTTTGTTTCTCAGGATGTAATATATTTATATGCTGTTTTTTAACTATATCAAGATCTTCA
AAGACATGTTTGGGGTCAAGAAATTTAGGATCAATTGTATCTGGTGCAATATAGCCCTGA
CATACAACGAAAATTTCAGAAGACTCATTACGAGAAGCTTGGGGCTTTGTAGCATGTACT
TTTTTGAAGAATTGTTTCAGAACCCATAAAAGTGCATGATAGTCTTTCGATCTGAATACT
TTAGTCACAAACCAACCACCTTCTCTGAGGAAGTTCGTTGCAAGTTTTAAAGCACTCAAT
GTTAGACAAGCTTGTTGATAGGCATCATGGATCCAATTAAGACCGACATTGGGTGCACCG
TCATTAAGTACCACATCAGCTTTCCATGTTTTTATTTCTTTTTTGATTGCTGCCTTACAT
TTTTCTGTAGTGATATCTTCAGTCAGACCTATACAACCTGGAACTGGTTTTATTGGAAAC
AAATCGACTCCGATTACTATGCTAGAGACTGGCATATTTTGGTGGGCCACCTGCATCCAC
CCACCAGGTGCAGCACATAAATCGATACATACTCGTGATTTCTGCAAAAATCCAAATTTC
CTGTTCAATTGTATTAATTTGAATGCAGCTCTTGATCTATATCCTGTTTCTTTAGCTAGT
TGGTAGTATTTATCTTTCCGTTGTTTTCCTACTTTTGTTTTCTTTCCCATTGTGGTATAT
TACTTTTTTAAGCATATGACTTCTGGGGTTATTTCTAAAAACAATTGATTATAATCAATT
ACATGATAAAAATGAATGCAACATGCACATTACGAGTGTGTGTACAAGTGAGGTTATG
(2698 bp)

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