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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23779_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_SMG5_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031625 F ubiquitin protein ligase binding
GO:0032204 P regulation of telomere maintenance
GO:0032210 P regulation of telomere maintenance via telomerase
GO:0035303 P regulation of dephosphorylation
GO:0042162 F telomeric DNA binding
GO:0042826 F histone deacetylase binding
GO:0051721 F protein phosphatase 2A binding
GO:0070182 F DNA polymerase binding
Transcript
Level		FPKM:10.29 TPM:9.52
ORF Entry
Sequence
(Nucleotide)
AATTTATTCTAATGAGAAATTAATTTGAATGGTGTTGTAACACACAGGCAATGAAACGGT
TGAGTAGTTTGTAATCAATGTGAACTAAAAATGATAATTTTCCCAATCGTATGCTATATG
AATACATTATGAATTATGAATTTATGGATGGTTATATAATGTTACACCGATATATAAACA
TTTATTATTGATACAATACATCAATAGAAAATTTTCCGCGCTACCTTCAATGAAATTATT
ATTAGTTTTTTTTTTTTTGTATAGTGAATAGTGAGCGTTTTGGACGTGTTCTATCAAAAC
CTCGCAAGAGCTTTTTGACGTTTTATCGATATCCTCGAAGTCCATTCTTTCCATAGTGAT
CAAAACCGGTCTCGTGATCGACACGCGTTCACCTCTTTTTACCGTTTTTATGCGATGTCT
GTCGCCATTTGCTGTAGAAATCTACGATGTTTTCTACGGAAATGCCGGCCGATTGCGCTG
CGCCCATAACACTAAATTCTTTATACTGTTCTTCATCTTCATCAGCATTGCCAACGAGTA
GTATAAGGACAGACGAAGACTTCCCTTGTAAAACGTTTTCAGCATCACCGGATCCTTGCG
TCTTTTTATCTTCCGCTACGAAATGATTGCAGAACTCTAAAATCTGAATAAAGTTATTAA
TATGGGCTGGAGCTTTACGGGGATATTTCAAGAGCGGCAGGGGCTTTGACTGGTTCGGAC
GTTGTGCTCGCAGAAATCTTGAGCCATTTTTTAATTGAAGTTCCAACCAACGGATAGCTT
TACGTGCTGTGCTCTGCTCGCGCTTCAAATTGTCCAGTTCTTGTAGCACAACTGTAGGCA
CCATGAGCACAAAGTTGGTTGTGAGTAGGAGCTGTTTGACACGACGGAGATGTTTGTTAA
GAGCTGCGGTGTCAAGTACGAGTAATGCCGGTGCCGCCGACTGTCCGCTGCGTTCCAACT
CGCGTACTTGTGATGTCAACCATAGTCGACCAAGGCGCCGTAGTAATCCACTTTCATTCG
ATTCAGTATTTTTCTTTGAATGCCATTCTCTACTTCTTTTATGGTTAATTTTGGTATTCA
ATTTAGGAGGGTGAATGTTTTTTAGATAAAACAATTTCATGGTCCTGTTAAATCTTATTC
TGGGTATAATTTTAGCTATCTGGTTCCCAAAATCTATGAAGTTAAGAATCCTTATTACGT
TTTCTTCATAAACAGATAATTTATACTTTTCTAAGATGTGCCATTCAGCAGCATCTTTAT
CAAATTTACAAATGTTTGTTCCCCGTAAATTTATATCTTCAGGTAAGGGTATTGTCTTAT
ATTCAAGTTTCATTTTCATGACTAAATTTCTAACGTACTTTATTAATTCACAATCTTCTT
TAGTCCCCTCATCAGATTTTGTATAGAAATAAAATGTAAAAATATTTAGCAAATCTACAA
CGCATTGAAACAAGGACTCTCCGCTGTCGCCACATGAAAGAATTAAATCTTTTTCAATCA
AAATCCAATCCAACAACAGCTTGATACTGGCCATGAAATTGTTTCCTTGTAAAAAAGTTT
TCAATTCTATAGTGTTTACTTTGCTGGTTTGCTGAGATTTTGTTGTATTACAATTCAATA
AATTTGATGAATTAAGTGAATTTGTTTCTGTAATCTTTGAGGTGATATCATCATTCAATA
TTCTATTTGGTTCTACTTTTTCATTAAATTGTTCACTACTTTCATCTTTAGTTTCATCGT
TAACTTCATCACAATCGCTAGCTTCACTAAGTGATACAGATTGATCAGAGGAATCTGACA
AGTCGCTATATGAATGTTCAATTTCATCTAAATCACTGCTTTCAGTATTAGCATCACTCA
CGTCAGAACTTTCTGAAGAGGCAATGCGTCGACGGCGACGACATTTCATAAGTGCTTTCT
TTGCATGCTTAGCATGACCATTTAGATTGTTTTCTTTTACATTATTTTGTTTCTGCTCCT
CCAATTCTTGTTCTGCATTGTGGCCATTGTTCACTGTGCTTTCTATAATTTCTTTATTTT
CATCATTATTGTTCTCATATTTTTCTGTTTGTTCATTGTGTGGTTTTGACGATCCATAAT
TATGAATCTGCCTAGGATTTACAAAACCAATTGAATCCAATTGCTTAAGCAATTTCAACA
AAAGTTGAGACAAAAGAGCAAGAGTGAAAGCTTTGCATGCAAAGGCTTTTGTTTCATCAA
TTTCTGTCATTTTTGAGACTGTGAATAAACAAATCAGAACCATACGATGTATTAGATTTG
GATTTAAATAAGATGGAAAATTGGTTTCATGTTCCAAAATTGATAGATAATCATCATAAT
TTTTATCAATATCAGGAAGTGTGGCTTCATTAAACTCCATGCAAATCTTTAGCTGCTGTG
CAATTTTGCTGCAGCGCTGAGGAATATCAGAATCAGATTTGATCAAGTACCATATCTCAA
TTAATGAAAGAAAATTCACAATTGTATTTTGTATATGTTCAACCTGAGTTAAAGTATCTG
ATTCATTTATTGTATGGTAAAACTGATCATTTTTCTCAAATATTTTTGTAAGATTACCCA
TGGCCCCTTCAAAAGGATTTTTAGAATTAAGACAGTGAATATAAAAACATACAGAATCCA
AGTTGTAATTTTTTTCAAGATAAAGGTTTCCTAATTGATTATAAGGCATTCCCAATGTAA
AGTCAGTATGAGCAGCTTGTAAGTAGTATCGAGCAGCAATTGTTGGTTCAAAGTGATTTG
ATATTTCCACTGCATAACGACTTAAATCCCCTAAATATATCAAACATGAGTGCAAAGCAG
ATTTCCCAAAATTTGATAGTTCAACATTACCAGAAGAT
(2858 bp)

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