SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23698_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		cleavage_and_polyadenylation_specific_factor_5_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005849 C mRNA cleavage factor complex
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0016787 F hydrolase activity
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0042382 C paraspeckles
Transcript
Level		FPKM:10.02 TPM:9.27
ORF Entry
Sequence
(Nucleotide)
GCCGAATACTGACGCTTGTTTGTCTTGGTAAAACAATTTTTAGCTGTGATCATCTCTGCA
TACGCGGTTTTGTTAAAAATAAGATCAAATATAAGATGGCAGCAGTTCAAGGGCCTCCCG
GTAACAAACAGTGGCCTGCGCGACCAGGACTACAACATCAAATAAGCCAAAACCCAAGCA
TGAATTTAACTCTCAATAGGTCTATTAATTTGTATCCGCTTACGAATTACACGTTCGGAA
CTAAGGAGCCGTTGTTCGAGAAAGACGCGTCGGTCCCGGCGAGGTTCCAGAGGATGCGAG
AGGAGTTTTGTAAAATCGGAATGAGAAGGTCAGTCGAAGGTGTGTTATTAGTACACGAAC
ATGGTCTACCTCATGTGCTGTTACTACAACTCGGCACTGCGTTTTTCAAGTTGCCTGGTG
GAGAACTGAACCCTGGAGAGGATGAAATTGATGGTTTGAAGAGGCTTCTCACAGAGACTT
TAGGCAGACAAGACGGTGTCAAACAGGAATGGCTCATTGAAGATACAATAGGGAACTGGT
GGCGACCGAATTTCGAACCACCGCAATATCCATACATTCCGCCTCACATCACGAAACCAA
AGGAGCATAAGCGCCTATTCCTGGTTCAACTGCAAGACAGAGCTCTATTTGCTGTACCGA
AGAATTACAAGCTGGTTGCGGCACCATTGTTTGAATTGTACGATAATGCTCAGGGATACG
GACCTATAATATCGTCGTTGTCTCAGAGTTTATGTCGTTTTAATTTCATTTATATGTGAT
AAGTGGTATTTAAAGTGAAGTGTGATGAAGAAAGTTTAAATGGAATAAATTTCTGCAATA
CTTCTGCAGCTAGACCACAACGAAGCTCAGTGTTAGGCAACTATGGATATCACCTTCCAC
AATATGTTTACCTAAAAACATCCAATTATTGTTCCAAATCCATAGGACAATTTAGGCTTT
CTTCATTATTAAACTTGTATAGATATATGCAAATGGACATTTTTTCTATAGTTTAAGATA
AGGTTTTCTATATATTTGTCAATAAAAGAAAATTGTCATGTTATATCTAAATAGTTATGT
GCGACAGAAAATATCTGAAGTGAGTGTTGTTATTAAGAGATGCATAAGATGTTGCAGGGA
CCGGTATGGATCTTGAGATTTCCCAGAAGAGTCGTATTGTTTTATAACTTGGGGGACTTG
GGACAATGTGTACAAAAGGGGTTCCTTAATTTTTTCGACAACTTCAATTTGACAATTTAT
TTGTTTTTTAACTGCAGTCATGATTTATATAACTTTGATTTTCTTTAAAAATACCTTCAT
ACTTCAGTGTGATTGAAAATCTTATGCCTTTAGAACTGCTAGCTCAGAAATATTTGTTGA
GGGATATGCAGAGAAGGGAATGTTCATTTAATGACATTTAATGAACTAATTGTTGAGTTG
TCACCATTCCCAATCTTGGAGCATCAGAAAGTACTAAAATTCACCAGCACTCAGACTACA
CTCAGCATCCAAGATCCAAGCTGTTCTCTGCTCTCTTAAATTGATTCAGTTGCAGACTGC
ATACCAATCTGATTATTCGCAATTATGAATTAGGTCAGCTGTTATGATGCAATTTAGACC
TTACAACTCAAGAAATAAAACAGCAGTTTGATTTAATGCTAAACTGCACTGGAGCTAGTT
TTGACATCAAGGCCACACGTCAAACTGACCATGACCTAATACGTAATTTCCGAATGCTAA
CTTATTCTAATTTAATGCAGATTAATTAAAATTTTAATTGAAAGTTAACTTGAAGAAACT
TTGTAACTAATAATATGTATTTTAATATTAAGCGTATTTGACTAAAACTTATGTAACACG
(1860 bp)

- SilkBase 1999-2023 -