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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23677_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nuclear_RNA_export_factor_1-like_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0000346 C transcription export complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0044822 F RNA binding
GO:0051028 P mRNA transport
Transcript
Level		FPKM:2.90 TPM:2.68
ORF Entry
Sequence
(Nucleotide)
TTTAACAAGTTTTTTACTTAATGTTATGGTGTCTCACAATAGAAATTTCAATATCTAAAT
AATTATTGTTAACAAATCTGCTTTTCATGTAATCTCAATAAATGAAAAACATTTTGTGTG
TTTCTTAACGATTATGAGTTTCAGAGTTCAAATTTGAAACATGTTTCCATAATGTTTGTT
CTCTCCAGTGATGTCCGGAAGAAGTTTCCCAAGCTGACAAGATTGGATGGTGCGGATCTT
CCACCGGCTATTGGATTCGACGTGGCTGAAGATATGGGGCTTCCCCCTCGGCAACAATCG
TTCCTGGTAGACCCGGCGGGTCAGGATCTTGTCAGGGAATTTCTCACTCAATACTATGCG
ATATACGACTCGGAATCCCGGCAACCACTTCTAGAGGCGTACCATGAAAATGCTACAATG
TCGATGGCTGCAAATTATTTAACGAATGACAGCAGGAATTCTACGACAACTAGGTTAAAC
TCTTACATATCGAACAGCCGTAATTTAACCCGAATAACAGAAAGGGAGTCGAGAAGGCGT
TACCTACGTACCGGAAAGCTGCAAGTAGTCTCCTTCCTATCAGATCTGCCAAAAACAACA
CACGATTTAATGGGTTTTGCTGTTGACTTACTAGTCTTTACTCCGGCCATGATCGTCCTT
ACAATGAACGGTGTGTTCAAAGAAACAAACACTCCCAATAACCCGATGCGTTCATTTCAT
CGGACGTTCGTGATAGTTCCAAATGCGAATGGTGGCTTCTCAATCATCAACGATATGTTA
TATATCACGAATACTACTAAAGAACAGGAGGATAAGGCCTTTTCAACGGGTACTGTAGAA
CCGATACCACCTACTCCAGCGCCCACGCCTACTCCTACTCCCACACTCGCAGCTGGGACG
CCAGATGATTCTCAGAAGATGCAGCTACTCAACATGCTTGGTCAACAGACGGGAATGAAT
GAGCATTGGAGTATCAATTGTCTTCAGGAAACTGGCTGGGATTTGCAAAGAGCTATGTTC
ATCTTTAATCAACTACACTCAGAAGGCAAGATACCGCCTGAAGCCTTTGTAAAGTGAATG
AATGTGAAAAACATTTGGAGCTTAAATTATAACTTTGTAAATAGTGAAAAGAGTGAAATA
GTGAGATATTTTATAGAATTATCAGAAGATTATATGGAATTGAAATTTTTTTTGTTGGTG
TTGGAATAAAAAATCTACACAACAAAGTGAATGGTCATAAAATGAGGAATGTATGTCTGA
GTCGACAAAGGATATGCAGTTTATGTGAAGAGAATTACTTTAAGGAAGTACATGTTTGTG
TACAAACTTTTTAGAAGAATAAGAAAATAATGGTTTACAGAAGAAAGTCAAGAATGCTTT
TGAAAGACGGAAACAATACAAAAGCGAAGAGTTATCTATTACCAAAATAAGTTTTAAATA
AGTTTTTTTCTGTAATAGTTGAAATTTATGCTGAAACAAATTACTGTAGAAATTATAGTA
CTAAATTATTTATCATCTGCAAAATGTTTGCCCCTCCATAGCATCCAATCTAAAATTTGT
TTTATGGTGGTTTGGATTAGACAAGAATTACAACAATTTCTGAGCAGATATTGGTGTCTA
CGATTCATTAATTAGGTAATTATTATTTTTTATTTATCACAAAAGTATATACATATCATA
GAAGTATATATACTTCTGTCAAATACAAAAATTAAAAACGAATGAACATGATCTCGATAT
CAGAACCATAAGATCGAAAATGTCGCTTCGCAAATAGCCAGATATCCTTACGCGAAGTAG
GGTGGAACTTGTTTTATTTTCAATCGAATTCGATTTTATGGATCCGATTTCGTGATTACA
TTTTTATATTGTAAAGAGAATTTACGCGATCTTACTTTTTTGAATACACCATTGAAATAT
TTTTACATACATTGCTCCTATTGTACCACTATAAATGCATTATATGTAAAATCGTGTTAA
TTCTCATCGGTTACTTTATCTTTCATCTACATTGAGACAACTGTGTTTTCTTAATTGCTG
TAATTAAATACTGCGCATTTTCCGCCTTAATTTATGCAGAATTGTATTCAAGCAAACCCT
GCTAAGTGGCGTGTGCAATAGTTGACTTGTTAAATCTGAAAGCATAGTCCTCCATTGCGC
AGTATTCTTTGAGCGCACACGTTATTGTTATTACCGTGCCTTGTTCTCTCTCTTGCCATT
TAACTGCCCAAGTAATACGAGATCAGTGAGTTTGTATGATGCTTTCACGAATCGTAGCCA
TGAAAAAAGCCTTAAGGTTCATTAACGTCACGCTCGTAAACACAAACTGTATTTGAATAA
AATGAAATTGTGAAATGAACCCTAAGTGTTTAGTAAAGAAATTAAATTTGCTCTCTTCGT
ATACGGGCCTAAATAAAAGAGGCAATGTAATGCAATTGTATGTTATAATGCTCTCATAAA
GTGCAAAAATAATATACTAATCAAATTGGAGTTTTAACAAAATAGGACTTGTCTAAACAT
GTGTAAGTTTAGAACAGTAAACATTTTGTAGTATCCTGTATATTAATGTCATTCTAAAAT
ACATTTGTATTCAATGAATATTAAAATAAAATTTAAAGAATATGTTGTTCTAAGAATGTT
ATTAAAGACGAAGTTTGTATAAGTTTTCAATTAAAATGCTTAAGTTTGGATTGAAAAAGA
ACATAGAGTGCCATCGATTGGCTGTTTGTAAGTTAACTCTGATATCTTTGATAGCATGAG
AGACGGAACTGATGTACCATTTTTACCAGCTCTTAACTCGAGCTAAAAAAAACATCTAAT
CTTATGGCTTTGACTTCATAATTTGTAATAAATACGTTTAATATCACCCTGATACTTGTT
GCTTATACTAATTAGATATTTTTAAGTTTGTTAGTGTTAGCTTTGGTTCCGATGTACATA
TTACGTAAATAGTTGTTCATCAGTGTATAAATTGTTGTGAATTTTAAATTTAATTCATTA
AAAATAATGTGAAAAAAAGAAAAGAAAAAAGAACAGATATTCGAAACTCGAATCTTGTAT
ATACATTTAAATTTAGATTTGGGGGGCTACAAATTATAATGGCGCTTCGTGGCGGTTAGC
GACTTTTTTTGCACAAACCGGCAGGCTGTCGCGTCGATTACATTGCTTGTTTTTCTTGCA
AAGCCAGCAAATAGTCCAGAGTGCGTGAAGCAGTGGACACGGTTCAATGCGATTACGACG
GAACCCCTTAATAAATTATTTTGTGGGCTAGTCGTGTGGTCGAATGAATGTTATGTTTAG
ATCGAAGACGTTTGACGCTTGGTCGTGTTTTGTTTGCGAACGCGCTGCCTTCTCGTGCGC
TGTGGGGGGAAAGCATAGGGCTACGATATAAGAATACGTTAAGAAATGCAGGGATTTATA
CGAAT
(3425 bp)

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