SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23672_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_nucleosome-remodeling_factor_subunit_NURF301_[Papilio_machaon]
Ontology
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016589 C NURF complex
GO:0016922 F nuclear receptor binding
GO:0019233 P sensory perception of pain
GO:0030097 P hemopoiesis
GO:0035064 F methylated histone binding
GO:0035073 P pupariation
GO:0035076 P ecdysone receptor-mediated signaling pathway
GO:0042766 P nucleosome mobilization
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045824 P negative regulation of innate immune response
GO:0046331 P lateral inhibition
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0046872 F metal ion binding
GO:0048515 P spermatid differentiation
GO:0048813 P dendrite morphogenesis
GO:0070577 F lysine-acetylated histone binding
GO:0070615 F ATP-dependent chromatin remodeler activity
Transcript
Level		FPKM:3.61 TPM:3.34
ORF Entry
Sequence
(Nucleotide)
AGAAATATGGTGATTGAATATTAAAAAATATAATAAGACACATTAGTGATTGTTCCGTGG
AAGTAGAAAATGGCCGCGTACCAAGTGATTTAGTTATATTTTGAAGTTGCTGTTATTAGC
GGGTATTATTTGTATGAATGAAAGTAGATTTTTATAGACTTACAAGTAATTAAAGTTTTA
TCGGTGTCTAAATCATTATCTTATATGTTAGGAGATGTCAAGAATTTCATTTTACAACAA
ATTACGAAAACGATATGGCGTCTCGTTAATCGACCAATAGGAAGTCGGTGTTTAGCGTTT
TAGAATTGCATGTACTAGTTCTAGCCCTCGCGTCATTGCGTTTTCGATGTGTTGGGCAAA
TTTGTACATCTCTAATTGATTTTCATTAAGTGAATGAGTTGACATTTCATTTTATTGTGA
AAAACTTTGTAAACAGTAACCAATTACGGACATATAGTGATACATTTCATGAAGCATCAT
AAACGCCTCCGAACATGACAACGTTGGGCTTTGGATAAACTGAAATGCATTATTACCGTG
ATTGTGTTTTTGTAAACAAAACTATGTTTTCACGGTGCACGTGCTGGAAAGTGTACAATT
GACAGCTCAATTATGTCAGGAAGGGGGGCAAAAAAACGCGGGAGGCCCCCAAAATCTAGT
AGTTTTGAAAAAAATAGAAAATTCCAATTTCATTTATTGAAAAAACCAAAATATTTGCAA
CAAAATGCTGTGAACACTTCTATGATAAACACTCCGTCGGCGTCTAGAGCTTCTTCACCT
CAAGGTAGTGATATTAGTAGAAGAAGTACGAGAAAGCGAAAAGATCGTAAAACACATAAA
AGTAAAAGAGGCGGAATATCCAATTCTTACTCGAAACGGGGTTATAATCCACAGGCAGCC
GATTACCATGAATCTGAATATCATTACGGTTCTGACTTTGGTGATGAGTATAGTGACAAA
TCCGAGCTCGAAGAAGAGCGCGGTAGTGAAAGTTCAGAAGGAAGCGAAGATGGTGCGGCG
ACCGATAGTGATTTTTCTGTGAGCAGCTTTAGCACAACGAGTGGAACACCGCGAAAAACT
AATACTATAACAAACCGACCTCCCAGTCCCGATCCATTGTGGTTGCAACAAGGAAGACAA
ATTCCACCCTTAGATTTACCACTTTCATCAGATGATCTAATTATACCCCAAAATTTAGTC
TTTCAAGTTGTAAGTGTATATGAAGTTTTGCGACATTTCAGACACTTAGTAAGACTGTCT
CCTTTTCGCTTAGAAGATCTTTGTGCTGCTATAAGCTGTGAAGATCAAAGTAACTTGCTG
ATTGAAGTACATATGATGCTACTTAAAGCATTGCTACGTGAAGAAGACGCTCAACAGACT
CATTTTGGACCTTTAGATCACAAAGACAGTGTAAACATTACATTGTTCTTATTAGATGTC
ATGACATGGCCAGAAGTTCTTAGAATTTATGTAGAAAGTGATAAAGTTTTTGATCAAAAT
GTGATTAAAATTTTAAACAGTTGTGAATATCCATTTACTTCAGTAGAAAATCGTTTAACA
GTTCTTCAGTTTCTGTGCAATCAATTTTTAATAACCAATCCTGTCCGTGATGATCTGTTA
AGTGAAGTTCCAATACATTATGATGATCACTGTAGAGTGTGTCATCGCTTGGGTGACCTT
CTGTGCTGTGAAACCTGCCCTGCTGTATATCATTTAGAGTGTGTGGATCCTCCTTTACTT
GATGTACCTTCTGAAGACTGGCAGTGTGCTTTGTGTAAGCAGCATAAGACTGTTGGTGTA
ACTGATTGTCTTCCTGATGCTGAGAAGCAAGGTCTATTATGTCGTCATGAACATTTGGGA
TTTGACAGACAGGGCAGAAAATATTGGTTCATTGCAAGGAGAATATTCGTTGAGTCTGAG
AATGGTCAAGTATGGTACTACAGTACTCCTCAACAGTTTGAAGAATTGTTGAATGTTCTC
GACTCGGAAGAAATGGAAACACCATTAGTTCGTGAACTATTAGAAATGAGGCAAGAAATT
TTAAGGCAAATGGACATAACAGAGAGTCTAACTAACCAAATGAAAGGAAATCGGAAATCA
TACTTAGAAGCTGAAAAAGCAAATGTCATCAAACAAAAAAAAAATAGGTCTGAACACAAG
CACCAAGACAGTAATCCACAATTAAAAGTGGATGGAAAAATTGATAACCTACCCACGATG
GATAGTGATGTGTTAAATGAAGTGACTATTATGAGTGAGGATTCTCAAGATAATAATGAT
ATAGATCAGGAAGAGTCAACAGATGAGGATGATGACAAAAAGAGTATTAACCAGTTAATA
TGTAAATCTAAAAATATAATGAAAAAAAAATCAGAAGAAGTTTCTGAACGATTAACAAGG
CAGAAATCTAATCAAATGTCAAATGGAACATATTTATTCAAATTAGGAAATGAAAATAAT
TTTAAGACCTACATTAACCAGTATGCAAGCAATTCTCTGGCTTTAAATAAACCTCAAAGA
AACGAGGAAAGGGACAAAAAACGCTATATGTCACATAAGTTTTCTCTATCTTCTACTCAA
GAGTTCAAATGGGTTGGTCTTCTGAATGCAACAAAACCATTCTTGGTTGCAACTTTGAGA
CAGACTCTGCTGCAGTTAGAATCTAATATTGTGCTACAGTTTATGCATCCAAATTGGTCT
TTATTGAGAAAACCATGGGTACAAGCAGTCCAACTTTGTCAAGCACCACGTGACTTCTCA
AGGGCATTGTGTGTGCTACAGGCTTGCATTAAAAATGTTGTGTGGGTACCAGCATGGCAT
GAACAGCTGGGTCATGTTAGGCTTATACGCACGACTGCTGCTGAGCGTGAAGAACGAAAA
AAGCTAGATAAAAGAGAGAAAAAAGAGAGAGATGAAGAAGAAGAGCGTTATCGCACTGCC
TACAATTTCGTAAAATATTCTCTTGGTCTTCGTCATCAGGTTTGGAAGCAGAAAGGAGAA
GAATACAGGATTCATGGTCAGTGGGGTTGGTTATGGAATTCCGCAACTAGAAAATACAAA
AAGCATAATTTTACTATCAAACCAACACTAAGCAATGGTCCAACCAAAATAGCAGTTAGA
GTGAGAGAAGGCAATGTGACTAAAATTTTAGCTGTCGAACCTAAAACATATGAATACTTA
ATTTCCAACGAAAATAATGAAAACAAAGATGTAACAGAAAAATTACCACCATCTATGCGT
AACCTTGTGATTCAAAAAGAAGACGATACCACTTTTGAAGAGATAGATGTTGAAAAAGCA
TTAAGCTCTTCCATAAGAAGATATTATCCTAAAATTGCTAAAAAATCTCGATTAGACGAC
TTCTTAGCACGACGAACTTATCTTAAATTTATGGAAGAAAAGAAATTAGCCAATTTATTG
CAAAATGTTAAAAAAGAGAATACTAGTGAAAAAAATGAAGATGACAAAAATATTGATGTC
GAAAATGAAGAGCCAGAACATGACATTTCTTCTATTTGTGACTCAAGTCAATTTGTAAAA
CCAAACACAAAAAATGTTGATGTTCTTAGAGAAAAGTATCAAGAACTATCACAAATAACA
AAACACTACAAATGCTATTCTCAAACTTGTAATAAAATTGAAAATTTATCAAATTTTAAC
ATTAATGCAAAGGTCGATTGTTACTCGCCTTTATGTATACTGAAGTTTAAACTTATAAAC
GAACTTGTAAAACTTTTGAAAAGTGATGTAATAAATTCGTCCAATATTTTTGAAAATTCT
AAAGATTCTTCAAAATTCTCGATATTGGAACAATATCTCCTTGGTAAAAGCTCATCACAG
CATAATTCTAATGATAAAATCTTAACAGATTTACTATCTGCTGTAGCATGTGCTCAGGAA
TATGATAACAAAAATAGCGACAGTTTTGTCAAGAGAAAGTTAAGTAATAATGATTCTGAG
GTTAAGACAGAAAAAACGGATGTTTTTGAAGATATCATTAAAACTGAGAGTACCTTAGAA
GAGTGTGCAGTGCCGGCTGTCGGAAATGAAATGGATATTGATATTACATCTTGCAACAAC
GAAAATGAGATGGAAGTTGGACCATTAAAAGAGCTGACTGATAGTGAGCAACATAATGTT
TCTGATACCGATAAGACGCGTCCTCCAATTCCGAAACTAAAAATATCTAGAGGAAAATCA
TCCAAATCGTCTAATACTTCAAAAAATGAGACTAAAGATTCTTCATATAATTGTTCTTTA
GCACAAATAAAAAGAGAAGAAAAAGCGAAGTATCGTGCGTCTGTCAATAGAAGATTTGGT
GGAGTAAAGACTTTTAAAAGAGAAGAGAAAAGCTTAAAGTCCGAAAAAAAAGAGGGTGAA
GTTGTCAGGATATATTCAGCCGAGTCTCCAAAGGGCAAAATTTATTTGAAAAGGGTGCAG
ACCACTGCTGTTGAAAAGAAAAAGAAACGAACTCCAGTAAAATACCCTTTGTGCTCTACA
TTTCACACTCGCAGTAAATCAAAAACAATAATGGTGTTACCTCATCATGAGTTAAGGAAA
CTATGCAGGCAGGCGGGGCATAGTAGTATATCTGGTTTCAGTCACAATGCAAAACCTAAT
CAAGGTGTTTGGCCTTATCCTTGCCCTAGACCATTATTTAAAACATGCTGGTTGTATAGG
ACGGTGAATTTGCAATGGCTCGCCAGTGCTGCTTTACAATTACGTATTATGTGGGCGTGT
TTAAGATGGGATGATATGGCTGCTAAGCCAGCTACTGCAGACGGTAAACACCAATTAACC
ACCGATACAGAAATAGTTTCTTTAGAATTGCTAAAACATCGTCATATGGGACAATTTTCT
GAACACACTCAATATCTGCGAAGACGTGTCGTGATACCTCTGGAATTGCCCAAGACTGTA
CGAGAAGTAACATCTATTCGTAGCGGCTTAAGAAAAAGAAAACGCGCAGAATCTCCTCAA
AATACTGAACCACAGGTCTCTGAGGAGTGGGTGGATGAGGACAAATTGGAATTATGGGAA
GTCCGTCAATATGGTGAAAAAACCGATCGCGGAACTCCTGTAACGCGCACATCAACTGGC
AAGTTGCCTCACAGAAACATTGCACCTCTACCAAATGCGTCTGATCTCAAAGATAAAATG
GAGCAACAACTACGTGAACAGCGAGCTGCACATCAGCAGAAAAGAGCCTTAGAGATGTCC
CAAGAAAAAGTAAAGTCTACTCCAAACCAAACAACTGGAAAAAGTACTCTTACTTCTTTA
TTGTCAACAAATGCTACAACACCTACTGGACAAAAAACCGTTATAGGCACTAGAAGAATA
ATTATGACAAAAGGAGCTGATGGTTCTACACGAGTTATTAGTCAATCCATTTCGAGTAAA
GCAGGACTGGATGGAAATAAATCAGCAACACCACCACCTAAAGATGGACCACAAAAAGTT
CAAATTATTCGGGCTCCAGATGGTAAAATTACAGTAAAAGGATTGCTTCCGGGACAACAA
CTGATACAAATGGCAGATGGTAAATTACATGTTGTCACGGCTGGACAACAAGGCATCACA
GGTCAGTTAGTGGCAGCTTCTCCTCCAATAAAGAATACGGAAATAACACAGAGTAAGTCG
GAAAATAAAGTATCCAGTACGACAAAGAATTCCAACGAAGAGACGCGATCGACGTCTACG
CCTCGCATTGCACCTTCGTCAACTCCGCAGCTAGTCGTTCAGGGCGGGCGCCAGCTAGTC
GTCCAACCGTCGCAGCAGATGGTCGTGCAGCCACCTCAACAGGTGGTAGTTCAGTCTCCG
CAACAGATGGTCGTCCAAGCGGGAATCCGCCCTAACATCCAGCCTCGTGTACAGCCTCTC
AACACTGTGGTAGTACAGGGACAGTTAATGCAGCGAGCTGTTGCGCCCCGGACGCCAGTA
GCGTCGCGCCCTCGTCCGGTCTCCACGCAACAAATAGTCGTCAATAATCCTGCTTTGGTT
CAACAAATAGCCGCCGGCAAAATACAGCTAGCTACTGTCAATGGACAGCAGGTTCTGATT
CGTCCGACTGGCAA
(6074 bp)

- SilkBase 1999-2023 -