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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23629_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		ubiquitin-conjugating_enzyme_E2_J1-like_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007286 P spermatid development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031625 F ubiquitin protein ligase binding
GO:0042534 P regulation of tumor necrosis factor production
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:1904153 P negative regulation of retrograde protein transport, ER to cytosol
Transcript
Level		FPKM:22.19 TPM:20.55
ORF Entry
Sequence
(Nucleotide)
CAAAACATAATATGCAACATTTCTTTGAGTCACTTCTAAAATATTTATTGCAAAAATACT
AACATTTGACTTAGTAAAATAGTTCAAAACAAGCTTTGCTTTTTAATTTATAGAAATTTT
AATTTAAAATTATTAATAACACTAGCGGAATGGTTTATTAATAGAAGTATCAAAGAAAAC
ACCATATTGAACTTAATCTATGATAATATTAAATAATTTACAATTCAGTTTCTGCTTCTG
CATAAAAAGCATTCCAACGCCTGTATATGAATATTCCAATTGCACCTACAAGAAGTGCTA
CAAGAATTTCTGTGAGTTGATCTAAAAAGCCAGTAACTGGTTCAGTAGACTCCAAAACTT
GTAGTTCAGGTTCTGGAGTTTCTTCTTCTGTAGGTGGAGGTGGCTTGGAACTTTGATCAT
CTTCGCCTTTGAATGCTATCTGGTTCAACACGGACTGCTCTTCTTCTGTTAGAGGTTTAG
CAGCAGTGGACGACAATAATAACTTTATTTCTCCACAATGAGAACAAGACCAGTTGGTGG
ACTTTTTAGCTAATATTTTACGCTCTGCTGGTGTATAGTCAAGCGAGCCTATCGTGCCTT
CGGCAGGCGTTGGCATGAATGCAATGAGAGCTAGCAATGCAGTCCTTATTGACCATGAAG
GCTGCCATGTCTCAGGATGGTGGCCAGATATAGATAGACAAATTTTTTTGTTAATTTCAA
ACCTGCCGTTAGGTGTCAATAAAATGATGTGAGGTGGATGCATGGGATATTCTTTAGGTA
GTAATATTCTTCCATGGTAAATGCCTCCTTCGAATTCCGTACCTTTAGGTCCTTGTACGG
TGAAGTGCCATTCAAACAGATTGTCTTCCAAAGGCCTTGCACAATATTCCTCAGTGGCCT
CGGCTAGTTCGATCGCTTCTCGCATTAATCGTTTTACTCCGGGACATTTCGTATTATATT
TTTCAACTATTTCGGCCATTTTATTTAATTTTAAACTATTATTTTGGTGACGCAATAATT
GACTTCCACACTAGCAAGTTAGCAATCTAATCAAACAAATTTGATAACAAAAAGGAAATT
GTTCATCTGTTTTCAACAAGTTTTTATACCCATTCCCATTTGTCGTCTATTTTGATGTAG
TACCATGACATGGGGTAAATTG
(1162 bp)

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