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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23611_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_general_transcription_factor_IIH_subunit_1_[Bombyx_mori]
Ontology
GO:0000439 C transcription factor TFIIH core complex
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
Transcript
Level		FPKM:2.19 TPM:2.03
ORF Entry
Sequence
(Nucleotide)
CTAGACTGATGTTAATGGTCGTAAAATTTGTATTAGAATGCTTGGTTGAATTATTTTCAA
TGTTTCTTCGTCTTGATACGCACCTTAATTAAAACAATATACTACGATAGACAGTACATG
CTTTAGAGGAGAAATGTAGGAGACCTTGAATTCAACAAAACCGACAAGTGTCAAGGTAAT
TTCATCCTGTTAGGACAAGTTCGGAAGTCAGGGTTTTTGAACTCTGAAAATTTGGTGGTT
CAAATATAAATTAAATTTAAATTTGTGAAGAATTAAACATGACAACATCATCCGAAGATG
TTTTGCTCAGCGTGAATTGCGTACGCTATAAGAAGGGAGACGGGACACTGTATGTAATGA
ATCAAAGATTAGCATGGATGTTGGAACACAGAGACACAGTCGCAGTATCTCATAAATATG
CTGATATCAAAACACAAAAAATTTCACCAGCTGGCAAGGCTAAAATACAGCTTCAAGTGG
TTTTACATGATGGCACATGTTCTACATTTCACTTTGTTAACCCGGGTGGCCCAGAGGCTC
AGGCCAAAGACAGAGATCAAGTGATGGTATTACTACAAAACCTTTTACCAAAGTTCAAAA
GACAGATTGATGGTGAACTAGAAATGAAATCTAAATTGTTGTCATTGCATCCAACATTAA
AACATTTGTATGAGGATTTAGTTATATCTAAAGTTATTAATAGCGAGGAATACTGGAATA
CTCCTACTTTGAAACAGTATACAGAATCTAGTAACATTAAACAGGAAGCTGGTGTGTCAG
GTGCATTCCTTGCTGATATTCAACCACAGACAGACGGTTGCAATGGCTTGAAATACAATC
TAACTCAAGATATCATAGATGCTATATTCAAAACATATCCAGCAGTCAGAAAGAAACATA
TTGATTATGTACCCAATAAAATGACGGAAGCTGAATTCTGGACCAAATTCTTTCAATCCC
ATTATTTTCACAGAGATCGAATAGCTTCGTCATCGAGCAAGGATTTATTTGGAGAATGTG
CTAAATTAGATGACCACGCTATTGCTTCAGCAATGAAACACACAACACTAGATCTTACGG
TTGATTTGAATAAGTTCATAGAGCCCGTTCCACTGTTACCGACTGAAGAAGAAGCTAGCA
ATGAGAAGGATCGATCTGATAATAATTCTATACACAGAAATATGATTAAACGTTTCAACC
AACACTCTATTATGGTGCTCAAAGCTAGTCAAAAATCAAATTCTAGTAATAATAGTAATA
GCAGTAGTAGTAAAACATCGAATAACAACAATA
(1293 bp)

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