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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23600_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LIM_and_senescent_cell_antigen-like-containing_domain_protein_1_isoform_X2_[Amyelois_transitella]
Ontology
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016337 P cell-cell adhesion
GO:0030054 C cell junction
GO:0043066 P negative regulation of apoptotic process
GO:0045216 P cell-cell junction organization
GO:0046872 F metal ion binding
GO:0050680 P negative regulation of epithelial cell proliferation
GO:2000178 P negative regulation of neural precursor cell proliferation
GO:2000346 P negative regulation of hepatocyte proliferation
GO:2001046 P positive regulation of integrin-mediated signaling pathway
Transcript
Level		FPKM:1.65 TPM:1.52
ORF Entry
Sequence
(Nucleotide)
TTTTCAACTTTCAACACACTTTCTTCAATAAGTATTTTTAGTCGATATTAAAAGTTAAAA
TAATCTAATAAAAACCAGATTTTTTAGTTTACCTAACGCATCATTGTTAAGTATTCTGGA
GTTCTCGTTAATTAGATTTGAGTACATTTGAAGTGAAAAATGCCTGGCTTAGCTACCATG
TCTCTTGATAATATGTATTGTACTCGCTGTGGGGATGGATTTGAGCCAAATGAGAAAATT
GTGAACTCCAATGGAGAATTATGGCATACAAATTGTTTTGTATGTGCCCAGTGCTTTCGC
ATGTTTCCTGATGGTGTCTTCTATGAATTTGAGGGACGAAAGTATTGTGAACAAGATTTC
CAAGTTTTATTTGCACCATGCTGTGCAAAGTGTGGAGAGTTTGTGATTGGCCGCGTTATA
AAGGCGATGAACTCCAATTGGCATCCGGCCTGCTTCCGATGTGAAGAGTGTAATGTAGAG
CTTGCAGATGCCGGTTTTATCAAGCATGCTGGTCGAGCATTGTGCCATGTATGTAACGCG
CGTATCAAAGCGGATGGGCTGCAGAACTACATGTGTCATAAGTGCCATGGAGTAATTGAC
GGAGAACCTCTGCGTTATCGGGGAGAAGTTTACCATGGCTATCACTTTACCTGTGCTACC
TGTGGAGTTGAGCTGGATCATACAGCCAGAGAAGTGAAAAATCGTCCTGGATATGCTGCA
AATGATGTTAATAACCTCTTTTGTCTTCGTTGCCATGATAAAATGGGTATTCCAATCTGT
GGTGCTTGCCGACGTCCCATCGAGGAGAGAATCGTTACTGCTCTCGGGAAACATTGGCAT
GTTGAGCATTTCGTTTGTGCCAAATGCGAGAAACCATTTCACGGCCATCGTCATTATGAA
AAGAAAGGCTTGGCCTACTGCGAACAGCATTATCACCAGTTGTTTGGCAATTTGTGCTAC
GTCTGTAATCAAGTTATCGCCGGCGACGTATTCACCGCATTGAACAAGGCTTGGTGCGTA
CATCATTTTGCGTGTTCCGTTTGCGATGCGCCGCTGAGCACGCGTAGCAAGTTCTACGAA
TACGACGAGAGGCCCGCCTGTAGACGCTGCTACGAGAAGTTCCCGGCTGAACTACGACGT
CGGCTACGTCGGGCTCATCACTACACGGTCCGCCGTTAACGAAAAATACAAGGAATAAAC
GACATTAATCTGTCTATACCAGTGGTGGGCAAACATTTTTAATGGCGGCCACAAAGTTTA
GGAAATACTAGAGAAGGGCCAGAATTTTAGAAAAATGTTTTTTTTTCCAATAAATAAACT
AATACCTGTGACAGACTGCCGAGATAATTATAATGATGGCAAGTTAATGATGAGATAATG
AAAGCTCAAAACACCCCTGACGACTTGTGGCTTTCATTAAAAATTCGAAGATTTTCAATT
ATAAACGTCAGATTTTATTTTACGTGCCAAAATGCTGAATAGAATATTTGGGACGGACGG
ACTCTCGGCGGACCGGATTAAAATACTTCCGCAGGCCGTACTTTGCCCATCACTGGTCTA
TACTATACTAAACCACTATACCACAGTAATGTCGGTGTTCACATTTTTTTAACATAATTA
ACTAACAAATTTAAAAATATAATAAATGTAGTATGCACTTGCCATTTGTGCCTTGAAGTA
CCTACTATTTAACAACTAAACTTATTAATGTAATATATTAAGTGTAAAATGTAATAATTA
ATTATTTTATACCATACAAAATATAATTATTATGAATGTTGTCTTTACTCGCACTGATCA
TTGACACGTTCGCTATTTTGTTCAAGTGCAATGGATTTATTTATTGATTTGACTCCTTTA
AAAATATTATTTTGAAGTCGCTCTTATCTATTTACGACCAGATGAGCTATAAGTCAATTT
AACTCTATTGGCAATAAAAATGTATCTGTTGAATGTGCTTGTAAACTTTGTTTTGAATTA
AGTCAAAATATCACTTTGGTCACGTGAATCTGAATTTAAAAGCACAAAATATAAACGTAG
AACTATTTCTAAGTTAACTATTTATATTAATGAACTCAAAAGGCTTGGCTTCATAAGCCA
AAACGGAAACAAATCTGTAGATATTGTACACTATATAAAGATTATTAATATAAATTTTCG
ATGATTTTTATAAACCAATTGAACTGAATATTACAGCAAATGTGTGGTCAAAATGACGAA
TTTGGATCTAATTATTTTTTAATATTAATTATATAAGATTATCTTAGCCAGGGACAATGA
CAGTGACAATCAGACCGATATAAATGATATTTGAAAAATCCTCTGAAATGATAAATATAT
TTCAAAAAATTATATTCATTCCATTTTGAAGAATGCTACTTTTGACTATAATATGCTACT
GCATTGTATATTAATGTCACGTTTTTAGCATGCCTTACATTAGACGAAAATTATGATTTA
AAAGAAAAAAGAAAACTTGTTTCGCACCCTTTGTAATATTG
(2501 bp)

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