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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23550_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		synoviolin-like_protein_[Bombyx_mori]
Ontology
GO:0000836 C Hrd1p ubiquitin ligase complex
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:6.81 TPM:6.31
ORF Entry
Sequence
(Nucleotide)
CCCCGCCGCCCCCTGCCGCCGCGCCCGCTCCCCCACCCTTCCCCAACATGCCACCTCCAC
CACCATTGATGGCGTGGCCCCCGCCGCCGCCACCGCGACCCGCCAACCTCGCCGTACTCA
CTACTGCCGAGCTGCAACGTATGGAGGGTAACGAACGCCGGAACATTGAGGCTAGATTAC
AGCTGCTACGCGAGATCCAGGCCATGCTGGACGCTTCTGTTCTCCTCATGCAACAGTACT
CTACAGTCGTCGCTAACTCTGCTCAGAATAACGTTAGTGTTGCCACACAAACCGAAACTC
AACCCGACCCTGCCTCTGAAGTTAAAGTAAAAACTGAACCTGATGTAGTCCCCAGTACAT
CTGAGTACAGGTCGCCATCTCCGGTGCCGTCGACCAGCAAACAGGAAATCAAACCTGAGG
AGTTGTCCGACGCAACTGATTCCGATAGAGTCAAGACTGACGCTGACACCGAGGAGTTGA
GAAGACGTCGACTGCAAAAGTTTACCTTGGATAAATGAAGCACATTTTGTATTATTATGT
TTGAGACTATCATTGATTTTCATTATTACATTATTTATGTACAAAGTGTCTTGATATGTG
TAAGCATTGTGTATTCTTGATTGGTTATGATTATGGAGTCGTATTTATGTTCTGTAAATA
TAATGAATACATAAATACATTACATACTATTTTTCTTGGTAACCCTATCAATGCTTAATG
TTGCCAAAATAAATCAAAGTGAAACAATTATTTATTTTCTTTAAACTAGTCTATTTATTT
AATATTACAGAATTAACTATTATAAAACGCATTTATATATCCATAGACTTTGTTGTTATA
ATTTTCGAGGACTGGCATGCCACTAAAGTATCTGCTTGAATCATAGAGTTTCACGTTGTT
TTTGCAGTACCATACATTTTTTATGCCTTCATTACCATCAACATTCAAAGTGTTCAGTTG
TAATATTCCAAAATGATATAGTTGTCCATCCGTTTGAATACAATTGACGAATATAGGCTC
TGGCAGGTCTTTGACGTCCTCCTGAAAAGTTAAAACACTATTTGAACCTTGTTTTATTAA
GTTTTTTATTGCTTAGAGGGGTTGAAGATCTCACAGCCCACCTGGTGTT
(1129 bp)

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