SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23507_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_phospholipid-transporting_ATPase_IF_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
GO:0055037 C recycling endosome
Transcript
Level		FPKM:21.86 TPM:20.24
ORF Entry
Sequence
(Nucleotide)
TTTTTTTTTTCGCATCGAATAGTTGGACTAGACCGAACGTGGTGCCAGAATTTTGAATAA
AAACATGCCGTGATTAATTCATAAAATGATTTATAGTGTTGATGTTTTATGCAACTGGCG
TTCGAGACTTGTTGAGTGTTTGCGTTCTCTGTGCCTTCTGATATGCTGTTGTTGTGGGAA
CAAAGTTTCGGCCGCGCCGGAGACTCGCCAAGTCGAGGTCGGCGTGGTCGACGAAGCAGA
CAAGAAGAAACACAACAAAATCAAAACCTCAAAATACACTCTACTCATGTTCCTGCCGAA
AAACCTCTCTGAACAGTTTCGAAGAGTTGTCAACTTTTACTTTCTCATCGTCACAGTTAT
TGCCGTTGTTATAGATAGTCCTGTATCGCCTTTCACAAGCATCGCTCCGTTATCATTCAT
GGTGTTCGTAACAGCTGTCAAGCAAGGCTACGAAGACTGGCTCAGGCACAAGACTGATAA
TAAAGTCAACAATCAAATTGTTGAAATAGTCTACAAAGGCGTGATCAAAGAAGTGAAAAA
TTCCACGATAGCCCCTGGAACCTTGGTTCGTGTAAAACGAGGAAGGGAAGTACCAGCCGA
CCTCGTGCTCCTCTGTTCCGCCGGAGAGAAGGGAAAATGTTATATCACCACTGCGAATCT
GGATGGGGAGACCAATTTGAAAACTCTAAGGGTGCCCCCACCTCTAGTCGGGTATACGCC
GGACATTTTGCCACAAAACATGCGTATCGAGATACCGAACCCGGTGGCCGACTTGTATAC
CTTTTATGGACGCCTCGAGATCCCGGGGCTAGACAGCATGGTGCTGTCCACCGATAACCT
CATGCTTAGAGGATCCAGAGTCAAAAATACGGAGTGGGCCATAGGTTGTGCTATTTACAC
AGGGGAAGAAACTAAACTGGCTCTCAATTCGAAATACACAGGGAACAAGTTCTCGTCGTG
TGAATTGGCTGTCAACGGGTTCCTGCTCTTCTTTATTTTGGTATTACTCATCGAAATGGT
CGTGTCTCTGATCGCCAAGCTTGTCATAGAGCACAGGAACCCCGAGAAGGACCTGTACCT
CGGCCCGGGCACGACGTTCCCGCCGCACGTCTCCGACCTACTTCAGGATCTTTTCTCGTT
TCTGCTGCTCTATTATTATATCATACCGATGTCTCTGTACGTGACCATCGAGCTGTATAA
ATTTATAGGAGCACTATTTATCGGATGGGACGAAGACTTCCGCTGCGAGGACACAGGAAG
ACCGGCGATGGCCAACACATCGGACCTCAACGAAGAGCTAGGTCAGGTCGAGGTTTTGTT
CTCAGACAAAACTGGCACCTTAACGAAAAACCTCATGGTATTCAAGACATGTTCAATCAA
AGGGAACGTTTACGAAGAGAGGAGTAACCAGCTGTACAACGTGGAGAGATTTGAGGAGCC
CGTCGATGTGCTTCAGACATCAAATTTTTCTTCAAAATCCTCGCCCTGTGTCATTCGGTT
CAAGTTTCCAGTGAAGACATGAAGAAGCTTAGCGCACGACTGTCTGGCGGAGGAGATACT
CAACTGATGAACTTCTTTCGAAGGAAAAAACAAAATAAAAATCCCAACAACGGAGTACTG
GACAATGTCAGTTGGGACTCGGCCTTGAAAGAAGCTGGCAGTAAAATGGACTACCAAGGC
AGCAGCCCCGATGAGAAAGCATTGGTGGAGGCCGCCGATAGAGTGGGAGTCACGTTTTTG
GGCGAAGAGGGCAATAATCTCGTATTGAAAGTGGGTGAGAACACGGAAATGTATGAAAGA
TTGCAACTCATCGAATTCACTTCGGAGAGGAAGAGAATGTCTGTTATTCTTCGTGATAAA
GACGGAAAGATATGGTTATTTTGCAAGGGAGCCGAAAGCTCTGTGTTTCCACTGTGCAAA
GACTCGGCTCTGGTGGAGGAGGTGAACAGGGACATCAATGCGTTCGCAGTGAAGGGACTG
CGGACATTAGCTATTGCTTACAGAGAGATTTCTGACGAGGAATACACTAGAGTCTCCGAA
AGTATAAAGCATGTAGACGGAAAGAGCGCGGAGGCTCTGCAGCAACTCACCCAGCAGTAC
CGGGTTTTAGAGCAACAACTGATATTAGTCGGCGCCACTGGAGTCGAGGACTGTCTGCAG
GACGACGTGGCCGACACGCTCGCCTCGTTGCGGAGAGCTGGCATCAAAACCTGGGTGCTC
ACCGGCGATAAGGTGGAAACAGCGCTCAACGTGGCCCAGTCGTGCGCGCACATATCGGAG
ACGGACCGGCGCATGTTCCTAGTGGGCGTGGAGTCGGCCGGCGCGCTGCTCGCCCACCTG
GACGAGTGCCGCCGGATCGTCGCCGAGCCCGGCTACCGGGACCTCACGCTGGTGCTGGAC
GGGACCAGCATGACGCAGCTGCTCGACGCCGGCGCCGCGCAGGCCTTCGTCGACATATCG
CTGCAGTGCAACGCCGTGCTGTGCTGTCGACTGTCGCCCATACAGAAGGCCAAGATAGTG
AGACTTATAAAGAGCAGTCCGCAGCATCCGATCACGGCTGCTATAGGCGACGGCGCTAAT
GACATCTCTATGATACAAGAGGCGCACGTCGGCTTCGGTATATTCGGAAGAGAGGGTCAT
CAGGCCGCGAGATCCGCAGATTTTGCCATAACAAAATTTTCAATGATAAAAAAGTTTTTA
CTCGTGTTGGGACATTGGTACTATCAGCGCTTGGCGACGCTCATACACTACTTCTTCTAC
AAAAATCTAGTCTTAGGTAATATAATGTTCGCGTTTCAAATCCAAACGGCCTTTTCGACC
CAATCGATATACGACTCGATGTACCTGACGCTGTTCAACCTGCTGTTCACGTCGCTGCCT
TGCCTCATCCTGTCGGTGACGGAGCAGCGCTGGCCGGCCGACATGCTGCTCAAAAATCCG
ACACTGTACAGAAGCATCACGAAGAACAAGCTGATGACGTGGTCTAACTTCGGGGTGTGG
TGCCTCTCGGCCGTGTACCACTCTGTTGTCATTTACATGTTCACGTATCTGATATTCGTC
GTGCCCGTCATTAATCTCGACGGGAACACTGTCGACTTGTGGTCGTACGGCGCTGCGCTA
TTCCACCTCACGATGGTCACCGTGAGTCTCAAGCTGTGGCTGCAGGCGCGCTACCACACG
CTCGTGTTCGTCGCCTCCACCCTGCTCTCCTTATTCAGCTACCTCGTCTTCAACACGATC
TACTCGCTCGTCTATCTACAAATCGACGGTGACGTGCTAGGGACGTACATTCGTTTACTA
ACATCTCCCGCGTTCGCATTTCTAAACTTGGTGGTTGTTATCGCGACGCTAGTGCCGGAC
TACTGCGTGCGGCTCGCGTCGGACCGCGGGGGCCGCCCCCGCCACGCG
(3408 bp)

- SilkBase 1999-2023 -