SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23449_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pleckstrin_homology-like_domain_family_B_member_1_[Bombyx_mori]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0016020 C membrane
GO:0031252 C cell leading edge
GO:0045111 C intermediate filament cytoskeleton
GO:0045180 C basal cortex
GO:0045184 P establishment of protein localization
GO:0051497 P negative regulation of stress fiber assembly
GO:0051895 P negative regulation of focal adhesion assembly
GO:0070507 P regulation of microtubule cytoskeleton organization
GO:1903690 P negative regulation of wound healing, spreading of epidermal cells
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
Transcript
Level		FPKM:2.85 TPM:2.64
ORF Entry
Sequence
(Nucleotide)
GGAGGGCGCCGGAGGACTCCAGCGTCATGGACGACAGCTTCATCGGGAACTGTTCCGTCT
TCGACGAGAGTTCGGGCTTGTTCTCATCGTCGATTGAAGAGTTGCAAGTCAGAAATTCTC
GCACCGAATCAACTGAGGAAGACAAACGCAGCGATGACAGTCGTCCGCTCAGCCACGCGT
CTGACTTCAGCAGGGACAATATTTTGTCGCTTAGCAACGCGCCACGCCGCAGCCGACGCG
GCATCGCACCCTACAGCGAGTCGCAGAGGCCCCTCACGCGGTACCTGCCCGTCGACAGGG
AAGACTTCGATCTGCGGAGACACGTCGAATCTGCTGGCCACCAAGTCGAACTCTGCCCCT
ACGTGAGCGTGACTTCGAGTTCGTGCCGCGGGTATTTACATAAACTGGGCGCCAAGTTTC
ACACGTGGTCCAAAAGATGGTTCGTTTTCGACAGAGAAACGAAAACCTTCGTATACTACT
GGGACAAGAGTGAGAAGAAACCCAGGGGCGGTGCTTATTTCCAAGTGATAGAAGAAGTGT
ATTTAGATCACGGCAACACGTCGAAATCGCCGAACCCACAGACGACGTTCATAGTCAAAA
CTCGACAAAGACGCTATTACTTAATGGCTCCGTCCGGGGAAGCGGCCCGGATATGGATCG
ATGTGCTATTCACCGGCGCCCAGGGATACACCGAGTACCTCGAGTGACAGCGACCATCGA
TTGACAGATGTCAAATCTGACGTCTGTCAAACGTGCTGTACGATCCTTTCGGTACTCTTT
GGTCGCCGATTTTTTTTTTTTAGGGACCGTTCTGAAAGCGACAGAACAATAGAATTGAAT
TAAAATAAAGTTTTGTCAATTTCGAAAACGACTTAAATTTTTACAATACGTCAATTAATG
CATTTGTGTTTGAATATGTAGCAACACTACGGTGTTGTATTATATCGATACAAATTTTCC
AATTGTGTAGTGGGTGTTTAAGAAAAAGCGCCTTATGTTTGTTTGATTCCTGAACGAATA
TAGTCTTAATGTAATTATAATGTGTTAATGCATTCTCGTGAGTACACATTAAGTACGTAA
GTGGGTAAAATGTATAGGTTTCTAAACAAACAGACAAACGAATCAGTATTTTTTTTAAAT
GAGTACATTTTATATAAAACACATATAAATTTATATGTATTCTTATATATTTACACACAA
AACAATCGTGCCAATTATATTGTAGAAATAACGTGGGAACGTATATTTTTATATGTGAAT
CTTAAAGTCGCATTAGATCTGGATTCTTATACGACATAAATAAATAGTAAAAAAATCAAG
ATGTCGTTGCGAAATACAAATTTCATATAACTCTTAAACCGCTTACAAAGTTTAATTCAA
AACATTTAGTACAAATATTTTATTAAGATTGTATCGATCAAACATCTAGTCGGTAAAGTT
CGCCGACTTTTCATATATATTATATACATTACATTATGTATAACTATTTTTTATATAACA
CGTATTTTAGTAAATAATCGGATTCATAGGTGCCTTCTAATAAGACTGAACAAAAATGAA
CGAAGACAACATGTTTGTCAAATGTAGTCGTAGTTGTGATAAAATAAAAACCCTTTGCCG
GTACAAAATAAAAGTGTTTCAAAATAATAATACAGATGTATGTAGTAATCTATGTATTTA
TACAACAATGAAATATTTTTTAAATAAATATTTTTAAAACAAATAAATAAAAAATTAACT
ATATTGATTTATATTTATAAATCTATAAAGGAATCATTATAAATAAATGTTTCTAAAAAT
CTGTATGTTTGTAGATTTATGTTTGCTGAACTTTTAAACGATC
(1843 bp)

- SilkBase 1999-2023 -