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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23287_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_focal_adhesion_kinase_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001525 P angiogenesis
GO:0002020 F protease binding
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005623 C obsolete cell
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0006508 P proteolysis
GO:0007015 P actin filament organization
GO:0007172 P signal complex assembly
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0008284 P positive regulation of cell population proliferation
GO:0009268 P response to pH
GO:0010812 P negative regulation of cell-substrate adhesion
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0021852 P pyramidal neuron migration to cerebral cortex
GO:0030054 C cell junction
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0031953 P negative regulation of protein autophosphorylation
GO:0032092 P positive regulation of protein binding
GO:0035994 P response to muscle stretch
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042383 C sarcolemma
GO:0042802 F identical protein binding
GO:0044319 P wound healing, spreading of cells
GO:0045087 P innate immune response
GO:0046777 P protein autophosphorylation
GO:0048471 C perinuclear region of cytoplasm
GO:0051894 P positive regulation of focal adhesion assembly
GO:0060055 P angiogenesis involved in wound healing
GO:0061098 P positive regulation of protein tyrosine kinase activity
GO:1904237 P positive regulation of substrate-dependent cell migration, cell attachment to substrate
GO:2000811 P negative regulation of anoikis
Transcript
Level		FPKM:2.49 TPM:2.30
ORF Entry
Sequence
(Nucleotide)
GACGGAGTAGAGGCGCGGGGGGCAGCGCGGGGGGAGGGCCAGCCGCTCGCCGTTCTCCAG
CTTGCCGATCACGTCGTTGTTCTTAACCCCGCTGAAGGGCTTCACGCCCAGCATCAGGAT
CTCCCACATGCAGACGCCGAACATCCAAACGTCGGAAGCGGACGTGAATCGCCTGAAGTT
AATCGACTCTGGCGCCATCCACTTAATAGGCAGCTTGCCCCTCGAAGCCTTGTAATAAGA
CTTGTCCTCGACCATTTTCGATAACCCGAAATCGGCCAGTTTAACACAGGTGGGCGTTGA
GACCAGAACGTTTCTGGCGGCGATGTCTCGGTGGACAAACTTCTTGCTCTCGAGGTAGCT
GAGCGCGGTCGATAACTGGTATATGTACAGAACTAGCTGACACGTCTCCAGCCTGTGCGC
GTTTTGCTGTAAGTAGGCCCGCATCTCGCCGAGTGTTGCCAGCTCCATGACGATCCATAT
CGGCGACGAGCTGCACACGCCGACCAGGCCGATGATGTGGGGGTGGGAGAACTGCTGCAT
TATATATGCTTCTTCTAGAAACTTCTCGGCGGTGTCCAAGTCGGCGTCCATCTTGCATGT
CTTCACGGCCACCGGCAGCACGTACTCGCCGCTCTGGCTCTTGCCCTGTTGCTTCTGGAT
GGACAGCTGGCGACGCAGCGACGGGTGGTTGGCTGACGTCACCCGGCACGTGCCTTTGTG
TACATCTCCGAACTGTCCCTCCCCAATAATTCCCGTCAACTCGATCTGATTACGAACTAA
TTCGTAATCGCGAACTGCAGGAGTAGAGTAGTCCGCATCGTCATCGACAATCTCTGCGTA
GTCCTCCGACAGCAGAGTGGCGGTGTTCGCCTCCCAGGAACTCGTCTTCCCTTCTGACGA
ACTGCTGCTCATCTCAGTTTTGCATTGACAGTTAAGTTGCTTCCACACGTTAGTCGTTCG
ATTCCATAGAGAAGTTTGAGAATCTGTGACCAGTCTACAATATCCGTCTACCAGATCTGC
TAAGCTTTCTGCGGCCTCTACACTGCTGCAAGTGATCGTCAATGTTTCCGCAGCGCCTTT
GACGCGCAGTTGCAGCGCTGCCTTGCCGCACGAACCGGTCTGAGTCTGCGATTGTTGGGT
GCAGTTCGACTTGAGCGTCTGTACGGCTTCGATGTCGCTGAACGAAGCTATCTTCGTGTA
GGTGGGTGGCTCGCCGGCCTTGTGGGACACGTACGATATATCTATATCAGGACCGATGGC
AAGTTCGACCGGTATGAACCAGCCGGTGCCGAGGGCGCCCGCGAATGTCTCCCGGTCGTA
CCCGTAGTGTGTGTGCATCGTTTCCAAGTACTTCAGCATGCATTCCGTGTCGCTTAGATT
AGCCACCTTCTTGAATTGCTGTTGTATTGCCTTCTTCAGCACCTTCGGCTTAATGGATTC
GAGCACAGATTTAGGGAGGAACTTGTGCAGGCCGAACTCCTTCTCCAGATATTCGATGTT
CGACTTTTTGTCCATAGAGATCTGCATGTCTTTACAAAAGTACTTAATTTCTAAACAACA
TATTTGCACGGCCAGCTCCTGGTCTACGGTAGGATGATTGGCATTGAGGTATTCGTGTCG
CACCTGATCGTAATAATAGTGGAAGGTAACGCGATCGGCTTCGCAGAGCTCCCTGAGGTT
CGCGGGCAGGTACCGTACTCGTAGCTCGAGCCGCCACTCGCTGGCCGGCCACTTCGTCAA
CAACTCCGAAACGGGAGTGTCCTGATGAATCCATCGGATCTTCCCGTTTGAGAGTCTCGC
TCGTAAAGCAAAACAGGACGCGTAGACCCTCTCTCCTGAGGCTAATCTCGAGGCAACGAG
TCGCAGCACCGACCTCACGTCTTCATCAGGCGAGGCGCGTACCAGATTGAAGCCGCCATT
CGGCAGATGCACCTTCAAGGTCGACTGATCCGCTACAGCGCCGTGCGTCTGAATGGGTGC
ATGTCGCTTGGGCGAGCCGCCCGTCGGAGCGGGCTGCATTGCTCTGGCTAACGCGCCGTC
TCCGCACCGCCCGCCACCTTCCGGCTCATGGCGAGGCAGTGAGAATGTCACTCGTTTACT
TAGCATGCCAAGCAGGTAATAACCAGCTCTTACCAACAAGATCGACTCGGGATTCGATGA
CTAACGATTAATATAACAATTAATTGTTCGTTTAATAACTTATTTTAATACCGAATGTTT
ACAATAATTTTGAAAACAAGAGTTTTTCACACAAATTATTGACACTTATCATTAGCCTCC
GCACCGCCCGC
(2291 bp)

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