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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23248_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_28S_ribosomal_protein_S2,_mitochondrial-like_[Amyelois_transitella]
Ontology
GO:0002230 P positive regulation of defense response to virus by host
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
Transcript
Level		FPKM:0.94 TPM:0.87
ORF Entry
Sequence
(Nucleotide)
TCTCAATTGTATTTGATAACTTCTGTCCCACCCTTCAAGCCAGTACGTAAGATTGCTTCT
TGGCAGAATATGTAGAACGGTTGTGTAGTAGCCATGTGGTACCATGGGGGAGACGACGAA
AAAACTTTCACGTTGCGTTCATACGTTTTATTACTTACTAGTACTTACTTAAATTAGCTT
CATAATATATGAATGACTTGTAATAAAACATGTTACAATTACAGTTTGCAAATACTATCA
CTTGGTGGTAACCAAATTACCGAAGTGCCCGAGAACGTAGGTCACTTAACTTCACTACAA
GCGTTGGTGCTCAGTGATAATTTGATCGAACAGTTGCCAGCAAGCATCACAAAGCTGAAG
AATTTAAGATCTTTATTATTGCACAAGAATCGGTTGAAAACTTTGCCCACACAAATTATT
AAACTAAAATGCTTGACAGAGGTATGAACTCAAATTTAATAAAAAACAATCTAAAAAAGT
GCCAATAATGCTAGTGAAAATACAATACCTAACCAAATTACCCAAATCTATATAAAAGAT
GTTTGAATACAATGCAACCGTGTAGCTTGCAATGCACTTATAGGAAAGTGGTTAACGCCG
CCTAAGCAATGCTAAACGTAACTATGGCGCAATTGTACGGTTGAAGAAAGAATGTGTGTA
ATGCCCAGGGAAAACCGAAGAATGAAGAAAATTATACAGCTTTAACAATCAGAACATATT
CGTTTTGCAAAGCCCAGTGTATCATGTAGCTACGGCAAGTAGACAAATCCTGGGCAATAG
TGAAGCTATTTTGGTGGTGGGAAGTTTATAGCGGCAGCATAGAATCATACAAATTAGTCC
TTAAAATTCATTAAAATGATTAATATTTTTTAACTTTGTTCCAAAGTATGCATGTATACT
GTATGTGTTTTTTTAATTACAGCTCAGTCTTCGGGACAATCCCCTTGTAGTAAGATTCGT
TAGAGACATGACTCTGCAGCCACCATCACTCTTAGAGCTGGCTGGTCGCACTGTGAAACT
TCACAACATTCCAATTGAAACTGGAGGTATTCCTAAGACATTGATCAATTATCTGCAAGC
AGCCCAATGTTGTGTCAATCCAAAATGCAAAGGTATAATAGTAGTACTTATTGTAAGATA
TAAATTATTTTTGTATTAGCTTGTGCTCAAATACGACCAAGCTACTTAAATAACAAATAT
ACACTTTACAAGGTGGAACCCCAATGTGTTCACCATTGCGAACCTTTTAGGAAATACTGA
TACATGGATCATAATGGTGCAATACATAGTGGCATTGTTTATCAATTTTATTTCAATATG
CGTTCATAAATGCATATTGTGCATTCACTAGTCAACAGACTAGATGATTGCACAACAAAC
AATATTCTAAAGTTCTCATTACGGGCGTTTAGAATAACAAAATCGAAACGCACTCAAAAC
CATTTTATTTTTCATGAAATTTAACTTGTCTATTGTGAGAGGAACAAATCAAATCAAATG
ATTTCCTGCGTGACATTAAAGAATAAATTAACATGTAGGGTCTTAAAACGTTTGCTGGTT
TTTTTTTGTTATGGAGATATAAAATATTCAAATACTTTATATCACCATTAACAATACTTT
TGTATGATATTTACCTATCACAACTAATTAACATATTTGTTACAGGTGTCTTCTTTGACA
ACCGCGTAGAACACATCAAATTTGTAGATTTTTGTGGAAAGTACAGGATTCCATTACTAC
AATATCTATGCAGTTCAAAATGTATTACTGGAAGTTGGGAAAGCCGTGAGGTAGACAGTA
ATCCTCACCCACATATGATGCGAAAGGTTCTTCTGGGTTAATTATGCCATAATGACATTA
TTAAGACCAGACAGATTAAAAATCACAAATTGTTTTTCTTGCTATCATCTATTGTCAACT
TGACGTTTTTAATTATTTTTATTTAGATTTTTTGTTGTACAATTTATATTACTTATGATT
GTGTTGTATTGGGACAAAATATTGTTAAACTGTTAGATATAATAATTATTATACACTGCA
TAATTAGAGAAAACAAAAATTTACAGAAATAATATTTTTAAAACATTATGAGTAATATAA
TGAAAATGTTTACCAAGTTGTGATATTTAAAGAAATATAATAAACAGAATTTATTGTTAA
ACCAACTAATTTTCTTTTACAACAATGATGTTACTCTGTCTCCTGTAGAAACTTACGTCT
TTCTTCCTTTCCTCTAATAATAGCACTTTTAAATAACTTACAGTAGAGCTCTATGGCTGT
TGGGGAATCATCATTGCCAGGTACAGGGTATGATATCAAATTAGGATTACAGTTTGAGTC
GACAATTCCAATTGTCGGTATTAACATTTTTGCACTATCTCTGACAGCCGTGTGCTGATT
CAAAATATTATTCTGGGTGTTAAGAAATATACATAAGTCAGGTAATCTTGTTATAGCACC
AAACTGCTGATTGGCATTTGTGAAGATACCACCTCTCCAGAATCTTGTATGAGCATATTC
TCCACATTCCATCGCTGTTTTTTCCACGATATGTGCATTTAGTGAATTCCTATTAAAAAA
ACAAATGATTCCACCTCTGTATGCAATGTGGGCTGTGAAATTAAGAGCTTTACGTAAATG
TTCAGCTGTTGTATCCAAATCAAAAATGAGGTGTCCAAGTCTTGAACCATATATGTATGA
TCTCATGTTATCATTAAGGGACCCTATTTTATGACCATAATGCACTCTTGCATCAAATAG
GTCTTTTACTGTAAATAAATTATGTACACCAAAATAATCTGGGTAATCAAGAGGATTTTT
CTGATTTTGTTGCACACCAATTACATTCTCTGGAATGACTTGTGGAGAAGTTGATGTGTA
TCTCAGAAGTGAAAATCCATATTTTGTATATCTACGCCCTGTATTACTCAAAATCATTAC
GTTTCTTTTTGTCCTATTTATATAGGAAAAGGAAATCAACTGATGGGTTTGTTTTTAAAG
TTTTTTTAGGTTATATTCA
(3019 bp)

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