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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23248_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_28S_ribosomal_protein_S2,_mitochondrial-like_[Amyelois_transitella]
Ontology
GO:0002230 P positive regulation of defense response to virus by host
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
Transcript
Level		FPKM:0.82 TPM:0.76
ORF Entry
Sequence
(Nucleotide)
AGTTAGTAAAGTCGCAGTTGCGCGCGCGTCGCGAAGGAGGTTAGACGAGCGATACGCTCG
CGACCTTTTGTAGTAACTGATAATGTAATCAACATTATATACTACTCCAGATGATCAATC
AACTAACGCACTACAACATAAAATGGAGTATTACACATCAGATAGTTGTGACAGTGACTT
CAGGGAGCAGAAAACACTCGATTTATCCAATCAAATGATAGATACATTAAGTATCTCTGC
TGAAATGAGAAGTATAGTGGATGAAAAAGATTGTGCTGAAAGCTACGAGATAATATTACT
GTACAACAACAGAATACAATCACTTCCAAATTTCCTAAACAGGTTTTGCAACTTGAAAAT
TTTGAATGTGAGCAACAACAGGCTGACTGTTTTACCAGATGTGTTTAAGAATTGTCCCCT
CACGACTTTGGTAGCAAAACATAATCAACTCACTAACGAGTCACTTCCCAAATCATTTTA
TACTGCAAAGAATACTCTTCGTGAACTGAACCTCAGTGGAAATCAGTTAAATTTATTCCC
AGAGCAGATATTCGAATTGACACATCTGAAATATCTTTACCTAGGCAGTAACAAAATAGT
TAACATACCAAAGGACATCTGGAAATTAAGCGGTTTGCAAATACTATCACTTGGTGGTAA
CCAAATTACCGAAGTGCCCGAGAACGTAGGTCACTTAACTTCACTACAAGCGTTGGTGCT
CAGTGATAATTTGATCGAACAGTTGCCAGCAAGCATCACAAAGCTGAAGAATTTAAGATC
TTTATTATTGCACAAGAATCGGTTGAAAACTTTGCCCACACAAATTATTAAACTAAAATG
CTTGACAGAGGTATGAACTCAAATTTAATAAAAAACAATCTAAAAAAGTGCCAATAATGC
TAGTGAAAATACAATACCTAACCAAATTACCCAAATCTATATAAAAGATGTTTGAATACA
ATGCAACCGTGTAGCTTGCAATGCACTTATAGGAAAGTGGTTAACGCCGCCTAAGCAATG
CTAAACGTAACTATGGCGCAATTGTACGGTTGAAGAAAGAATGTGTGTAATGCCCAGGGA
AAACCGAAGAATGAAGAAAATTATACAGCTTTAACAATCAGAACATATTCGTTTTGCAAA
GCCCAGTGTATCATGTAGCTACGGCAAGTAGACAAATCCTGGGCAATAGTGAAGCTATTT
TGGTGGTGGGAAGTTTATAGCGGCAGCATAGAATCATACAAATTAGTCCTTAAAATTCAT
TAAAATGATTAATATTTTTTAACTTTGTTCCAAAGTATGCATGTATACTGTATGTGTTTT
TTTAATTACAGCTCAGTCTTCGGGACAATCCCCTTGTAGTAAGATTCGTTAGAGACATGA
CTCTGCAGCCACCATCACTCTTAGAGCTGGCTGGTCGCACTGTGAAACTTCACAACATTC
CAATTGAAACTGGAGGTATTCCTAAGACATTGATCAATTATCTGCAAGCAGCCCAATGTT
GTGTCAATCCAAAATGCAAAGGTATAATAGTAGTACTTATTGTAAGATATAAATTATTTT
TGTATTAGCTTGTGCTCAAATACGACCAAGCTACTTAAATAACAAATATACACTTTACAA
GGTGGAACCCCAATGTGTTCACCATTGCGAACCTTTTAGGAAATACTGATACATGGATCA
TAATGGTGCAATACATAGTGGCATTGTTTATCAATTTTATTTCAATATGCGTTCATAAAT
GCATATTGTGCATTCACTAGTCAACAGACTAGATGATTGCACAACAAACAATATTCTAAA
GTTCTCATTACGGGCGTTTAGAATAACAAAATCGAAACGCACTCAAAACCATTTTATTTT
TCATGAAATTTAACTTGTCTATTGTGAGAGGAACAAATCAAATCAAATGATTTCCTGCGT
GACATTAAAGAATAAATTAACATGTAGGGTCTTAAAACGTTTGCTGGTTTTTTTTTGTTA
TGGAGATATAAAATATTCAAATACTTTATATCACCATTAACAATACTTTTGTATGATATT
TACCTATCACAACTAATTAACATATTTGTTACAGGTGTCTTCTTTGACAACCGCGTAGAA
CACATCAAATTTGTAGATTTTTGTGGAAAGTACAGGATTCCATTACTACAATATCTATGC
AGTTCAAAATGTATTACTGGAAGTTGGGAAAGCCGTGAGGTAGACAGTAATCCTCACCCA
CATATGATGCGAAAGGTTCTTCTGGGTTAATTATGCCATAATGACATTATTAAGACCAGA
CAGATTAAAAATCACAAATTGTTTTTCTTGCTATCATCTATTGTCAACTTGACGTTTTTA
ATTATTTTTATTTAGATTTTTTGTTGTACAATTTATATTACTTATGATTGTGTTGTATTG
GGACAAAATATTGTTAAACTGTTAGATATAATAATTATTATACACTGCATAATTAGAGAA
AACAAAAATTTACAGAAATAATATTTTTAAAACATTATGAGTAATATAATGAAAATGTTT
ACCAAGTTGTGATATTTAAAGAAATATAATAAACAGAATTTATTGTTAAACCAACTAATT
TTCTTTTACAACAATGATGTTACTCTGTCTCCTGTAGAAACTTACGTCTTTCTTCCTTTC
CTCTAATAATAGCACTTTTAAATAACTTACAGTAGAGCTCTATGGCTGTTGGGGAATCAT
CATTGCCAGGTACAGGGTATGATATCAAATTAGGATTACAGTTTGAGTCGACAATTCCAA
TTGTCGGTATTAACATTTTTGCACTATCTCTGACAGCCGTGTGCTGATTCAAAATATTAT
TCTGGGTGTTAAGAAATATACATAAGTCAGGTAATCTTGTTATAGCACCAAACTGCTGAT
TGGCATTTGTGAAGATACCACCTCTCCAGAATCTTGTATGAGCATATTCTCCACATTCCA
TCGCTGTTTTTTCCACGATATGTGCATTTAGTGAATTCCTATTAAAAAAACAAATGATTC
CACCTCTGTATGCAATGTGGGCTGTGAAATTAAGAGCTTTACGTAAATGTTCAGCTGTTG
TATCCAAATCAAAAATGAGGTGTCCAAGTCTTGAACCATATATGTATGATCTCATGTTAT
CATTAAGGGACCCTATTTTATGACCATAATGCACTCTTGCATCAAATAGGTCTTTTACTG
TAAATAAATTATGTACACCAAAATAATCTGGGTAATCAAGAGGATTTTTCTGATTTTGTT
GCACACCAATTACATTCTCTGGAATGACTTGTGGAGAAGTTGATGTGTATCTCAGAAGTG
AAAATCCATATTTTGTATATCTACGCCCTGTATTACTCAAAATCATTACGTTTCTTTTTG
TCCTATTTATATAGGAAAAGGAAATCAACTGATGGGTTTGTTTTTAAAGTTTTTTTAGGT
TATATTCA
(3428 bp)

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