SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23208_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA_polymerase_II_subunit_A_C-terminal_domain_phosphatase_isoform_X2_[Bombyx_mori]
Ontology
GO:0000922 C spindle pole
GO:0004721 F phosphoprotein phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006366 P transcription by RNA polymerase II
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006470 P protein dephosphorylation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008420 F RNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0010458 P exit from mitosis
GO:0015629 C actin cytoskeleton
GO:0016591 C RNA polymerase II, holoenzyme
GO:0016787 F hydrolase activity
GO:0030496 C midbody
GO:0050434 P positive regulation of viral transcription
GO:0051233 C spindle midzone
GO:0051301 P cell division
GO:0061052 P negative regulation of cell growth involved in cardiac muscle cell development
GO:0070940 P dephosphorylation of RNA polymerase II C-terminal domain
Transcript
Level		FPKM:6.26 TPM:5.80
ORF Entry
Sequence
(Nucleotide)
GAGCGGGCTGCTGCAGTGCGCCGGCGGCCGGCGACAGCTGCTCTGTCCACCTCTTTGTAA
TGTATATAATTTCTCTTCCACTCGTTCCCATCGTTCCGCACATGACCACAGCCAATCTGG
TGTAACAACATGTAGTTTGCTGGATTTCTTCTCAGTCATTCGCCTACTAGCGTTTACTTT
TGCCGTGCCTGCTCTAACAGCTACTAAATGAGTTGTTTTATCAGTAAAATCCTGTGTCAC
CTCAGCACCAAGACTTCTCGCCACAAGATATGCTCTAGAAGTTTCCAGTTTCTGATGTGT
TGGCACTAAACCACTAAACACTAAACTAGTTCCAGTCAACACTTCACTTTTAACTTCAGG
TATTACTATTTTAAGGTCTGGTATCTGTTTCTGACCCATTTTGTCATAGACATCATAAAA
ATGCTTATGTATCCTCTTCAAAATATCCTCCAAATAGATAAGATAATCATCAGGATCTTC
CACCTCTATCTGTCCATCAGATGTCTCTGTCCATACTGGCTCAGCTGGCGGTAATTCAAC
TTCCTCAATTTTTTCATTGCCTTCCTTAATATCAACTGGCTTCTCTTCCATTACTTCTTT
TATGACTTTTCCGTTGCTACCTTCAGTAGGTTTTTCAAAGTTGTTAGCAGGTTTTTCTAG
ATTTTCATCTGGTTCTGCATCTAAAGTCGGCATTTCTTGTACTTGTGGTTGAGTACCATT
TTTGCCGATCGTCAATTTTGGTTTCTCTTCAATTGGTGGCGGTGCATTGATATCGCCGGT
CGATTGAAAAAATGAGTAAGGCCTGACATGAATTAGATTAGCAGCATGTCTCCACACATC
TTCCCGATCGTCAATAATGCAAACCATGTTGTCACCACAAGGAAACAGTGCTTTCAGATT
GGCTGCTTTAGTTCTAGGATCAAAGCATTCATCTCTGGATAGTATCCTATGTGAGAAATA
TTTCTTTTCAGGATCTAGGAGCTCAGCTACGGCATGTGCATATTGCCTGGCTCCAAATGT
ACATATGTGAAGTTCATAGTTCTTTGCTGCTGATTCAAGAAACTCTTGAGTGCGTGGTCG
AAGCCTCGTATGACACCAACGCCCTGGCCCTCCAGGTCCTCTTAGGAAGAAGTGTAATAC
TCCCTTTAGATTGGGTGGTATATTGTCATTAGTAGTGTGAACTAATGTTTGATCTAAATC
TACCAGAAGTACTAATTTCCTGTCTTTCAGAAGACGCTCAGCATCCTCTTTACCTAGTTT
TTGTGCCAGTTCTTCAGACACTTTTAATTCAGGTACAGAGTGTACCATTGGTACAATGGC
CACGTCCAGCTTCTTGGTCTCCTCGCTGCGGAGGTCTGCTCCACACTCCGCGCACATCTC
CATCATCACTGTTGGATGGCGGCATTCTTCCAAATCTGCTACAGCCGAACTAGGTTCTAC
TACGTCTCCTTCTTTCACCTTGATCGATGACACAGTACCAGCGTGTGATGATTTAAATTT
CTTTAACTCTTCACCATCGCCCGCTAAATCTTTGTATAAAAATAATACTTGGCCTTGTGT
TACCACAGTACCTTGTTTTATTTTCCACTTTGCGAGTTTCACAGGCTTTTCTGATGGAAC
AAAAATAGGTATAGTTTTGTCGGCCATCTTGAACGG
(1656 bp)

- SilkBase 1999-2023 -