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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23190_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		small_nuclear_ribonucleoprotein_sm_d2_[Bombyx_mori]
Ontology
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005685 C U1 snRNP
GO:0005686 C U2 snRNP
GO:0006397 P mRNA processing
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0008380 P RNA splicing
GO:0022008 P neurogenesis
GO:0030529 C ribonucleoprotein complex
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:13.52 TPM:12.52
ORF Entry
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTACACTTTGGTTTATTATAGAAATTATAAACTTATTGACAGGTT
TGTGGACTTCTTGACCATTGTAATTTTGCCATGTTTCTTTAAAAATGTTAAAGCATCTTT
ATTTTACAAAATTGTTGGTTACTACTTGCACCAAAAGTAAGTATCTTTTTTTCAATTTTG
GTATGTTCAGCCACTAATATGAAGTTATTTTATGCTAATATTAACAACAATACTGGTGAG
ACTCTTTTAATGCATCATAATAATAACTGATCGTTTTTAGCTTTATCTTACAATATGTGA
ACTTAATACAATTTCAATATATTAAAATATCGAGTTTGTTTATTTATTACATAGAGTTGC
AGAATCAGAGAACCAACACAGTTTTAAAGGTAATCCAATTTTGTAAAACAGTATTATTAC
AGTTTAAGGAATGAACCAGTAAGCTATTCATTTCCTGGATATTTTTATTCATTAATACTT
AAACTAATTACTGAATTACTTCCCTGCAGCTGTAGCAAGAGGATTCCTTAGTACTAAGAT
CACAGAATCACCGCGGAGGAACATTTTGGAGATGAATTTGTCCTTGTTTACAGCTTTGCC
CTTCTTTCCTTTGCCAGTTCTCGGTACCTCGGTCCACATTTCCTTAACATTCTCCAATAC
CATGTTACAATGCCGGTCGAAAGCCTTCACTCTACCCAAAAGTTTCTTATTGTTACGGCA
ATTTATCAGAACTTGTGTGTTGTTCTTTACTGACTGCGTAAGCACGGAAAGAGGTCCAGT
ACTAAACTCTTCCTCTTCGATTTTAGATAGCTCTTCTAGGGTCATTTCAGAGCGTGGCTT
GGTTGTTGACGTCATTTTGTATTATTTTATGGGCCTGTGAACTGAGAAATTGAGTGAAAA
AGATTACAATTACGGCAAAACTATCGTACACACGCTAAGTCGACGCTTTATTTTG
(955 bp)

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