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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23153_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_DEAD-box_helicase_Dbp80_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0010501 P RNA secondary structure unwinding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0031965 C nuclear membrane
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0051028 P mRNA transport
Transcript
Level		FPKM:4.67 TPM:4.33
ORF Entry
Sequence
(Nucleotide)
GAGTGACTTGTCTTGCTTGGTGCCGCTTATTGGATCATAAACAGTAGAAATAAAGATTCT
TCTAAGTCATAAACATGGCTAGCCAGTGGGGACAAAAGGCAGAAGAGTTGGAGATTTCAA
ATAAAGTTGCAGGGCTGGGCTTGGATAAAAAACATAACCAAGAAACAGATTCTGATGATG
TACCTGATACCCCTAATGCAGCCGATACTTCTCTTTTAATGAAAATCATACGGCAAGGTC
TAGTTGAATCTAAACTAGATATAGAAATACAGAGAAAAGATCCTAATTCACCATTGTATT
CTGTAAAAACATTTGAAGCTTTGCATTTGAAGCCAAATTTACTGAAAGGGGTTTATGCTA
TGGGTTTTAATGCTCCATCTAAAATTCAAGAAACAGCACTTCCTACACTCTTAGCTGATC
CTCCACAGAATATGATAGCCCAGTCACAATCAGGTACAGGAAAAACTGCTGCCTTTGTTT
TAGCGATGTTAAGCAGAGTTGACTCTAACAAGAATTATCCTCAAGTATTGTGTCTTAGTC
CCACATATGAACTAGCCATACAAACTGGTGAAGTTGCTGCAAAAATGGCAAAATTTTGTC
CTGAAATAAAGTTAAAGTATGCAGTTAGAGGGGAAGAACTTCCCAGGGGTTCAAAAATCA
CAGATCACATTCTTATTGGTACTCCAGGAAAGATGTTTGATTGGGGTGTCAAGTTTGGCA
TGTTTGATATGGGTAAAATTAAAGTTTTTGTGTTAGACGAAGCAGATGTCATGATCAATC
GACAAGGGCATCAAGACCAATGCATTAGAATTCATAAATGCTTACCATCAACATGTCAGA
TGATGTTTTTCTCTGCAACATATGGTACTGCAGTCATGCAATTTGCTGAGATAATTGTTT
CTAATCCAATTATAATCAGACTTTTGAGAGAAGAAGAATCACTAGATAACATAAAACAAT
ATTATGTAAAGTGCAAAAGTGCAGAAGACAAATATAGAGCTATTTGCAATATTTATGGTG
TAATAACAATTGGTCAAGCAATTATATTTTGTCATACACGAAAGACTGCAAGTTGGTTGT
CTGAAAAGATGTCAAAGGACGGTCATTCAGTGGCTGTCCTTTCTGGTGAATTGACAGTTG
AGCAGAGAATTGCAGTACTGGATCGCTTTCGGGTGGGTCTTGAAAAAGTATTGATCACAA
CTAATGTTTTGTCTCGTGGAATTGATGTTGAACAAGTTACTTTAGTTGTCAACTTTGACA
TGCCCATGGACATGAATAGGAAAGCAGATTGTGAGACATATCTGCACAGAATTGGGAGAA
CTGGTAGATTTGGAAAAGCTGGTATTGCAATTAACCTCATAGACTCTCCGCAAGCTATGG
AGATCTGTACAGACATTGAAGCACACTTTGGTAAGAAAATTCAATTACTGGATATTGAAG
ATGCAGAAGAAATTGAAAAGATTGGGGCTTAATCGAAATTATATTTGATTAAAAAAAAAC
TCATTTCTACTTTTTATATATCAAAATGCTCATCTATTGCTTCTTATCAGGATAACCATC
ATAATAAATGTTTGTGTAGAAAGC
(1584 bp)

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