SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23146_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_chitinase-3-like_protein_1_[Papilio_xuthus]
Ontology
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 F chitinase activity
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005975 P carbohydrate metabolic process
GO:0006032 P chitin catabolic process
GO:0006915 P apoptotic process
GO:0006954 P inflammatory response
GO:0007250 P activation of NF-kappaB-inducing kinase activity
GO:0008061 F chitin binding
GO:0009612 P response to mechanical stimulus
GO:0010800 P positive regulation of peptidyl-threonine phosphorylation
GO:0030246 F carbohydrate binding
GO:0030324 P lung development
GO:0034612 P response to tumor necrosis factor
GO:0045766 P positive regulation of angiogenesis
GO:0048471 C perinuclear region of cytoplasm
GO:0051216 P cartilage development
GO:0051897 P positive regulation of protein kinase B signaling
GO:0070062 C extracellular exosome
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:0070555 P response to interleukin-1
GO:0070741 P response to interleukin-6
GO:0071347 P cellular response to interleukin-1
GO:0071356 P cellular response to tumor necrosis factor
GO:0072606 P interleukin-8 production
Transcript
Level		FPKM:6.65 TPM:6.16
ORF Entry
Sequence
(Nucleotide)
GACATCTGTAACTTAAATAAACATATTTAATATGGTAGAAATCGGATCTTAAAAATAAAT
TTATTTGAGAGCTAAGCCTCGACTAGATCTTTGCACACACAGTCGTTAGTCGCCTACGAG
TTCCGCTTTAGCCTCTAAAATGGAATGTCCAATGTCGAATGCTGTTTTCACAACATCCAT
AGTTTCGGCAGGTGGTGCAGCATTTATAAGCTCATTTACAACACTGTCATTGTTATAGGT
ATATTAAATCTAATGTTGTAATTATTATTTGTACTCCTCTTCAGATTAACCTTATGGCAA
TTATATTCAGCCTTCAGAATGATAAGACTACTAGATGCATCGACATAGTGAACAAAAAAG
GCTGCTTGCCCTTGCTTGATTTAGATAACACCTATACAGTTGATAGTCATGTTTATGAAA
ACAAAAGAGATAACGATTGGTCAAACTGATCTTGGAAATAGCGATCGCCTAAAATGAAAC
AAACTTATAAGAGTTCGTGCGGAAGAACCGCGAATGTTAGTTCACATTATGATACTAGTC
AGGTCTCTTGACAAATTAACAGACGTTGTAACAGTATTGTAAAGCCCAAAACCGATTAAG
ACACAATGTAGACAGCGCAAATCGAGAGTCGACATAAAGAAAGCTATAGGTCTCACTAAG
GACAGTTCACACAGATCGACAACAGTTCGGTTAGAAAACAATCGTGTCTGACTATTTACA
TCTTTTATTAGTTGCTCGACAAATCGTTCTGACGGACGAACTAGTGTATTGTTCATAATA
CGTTATAACTGCCCACATGTACGTCACGCCCAGCGATTATTATGGCGAGCGCCTCAATAA
TTTATCTTATTATATCATATTTGGCCTGAAGGCAATCAACTCTCCCACACATTGTCGGCA
AACTAGAATAAATGTGATTTAACGGCATAAAACAGTGCCCAGTGGAGCGTATATCTCCGG
ATAGGGGGTAGAGGTATGAAACAGTAAGACAACATTCTTACTTTTTTAGAACGGTAAAAG
TTAATTAATATTGTCTAATGAAGGCGCGTGTGTTCTGTTTGGACGAGCACGAGCCGGCGC
GGGCGACTTCGCGCACTGTACGCGAGTACTACAGCAGCAATGACATCCCGCACCATGTAT
AAAATCACCTATGTCACCAAGAGGCAACAGGTACACTATTTTCTTATCAACACTTACTTT
ATTAGACTTGGGCCGCCCCTGCTTAGACAAGTATAACATCTTGTGTGCTTTTGGTTATGA
GAGTGTCCCTAATTGATTGAACAAGAGGGAACAGTATGGTGTTATTTGTTTTACTAGTAC
ATTTTCCTTCATAGTCATCAGCATTTAATGAATACACCATAGCACCTCGTAGTCTATTGT
CTTTTATATATTTTGCCTTCTCCATGACACTGTGAGCTGAGTCAAATGAGGTCCATTCTT
TCTGTTTATATAAGTAAGGCACTTTTGCGTGATCATCAAATATCACTCTAACATTACTGT
TGGCTACAAATAAGCAAACATCTGGGTAATTAACAAAGCCTAGTGAACCTAGAGATCCAT
AGCCTGAAGCTGGACTGCCAATATTTGGGTTGTCTGCATTCACTAGAGTAAATGAATGTC
CATATGTTGGTATTCCAACAACTATCTTATCTCGATCCAATCCTTTATTTAAATACATGT
TGACTGTGTAATTAACATTAAGTGTGCCCATGTACAAACTTTCCGAGGGTCTTGAGAATA
ATGGGGAGTTGAAGCCAGTGAATGGAGTGTATTTAGTATAATAGTGGTAGTCATATGTCA
TGATGTTAACATAGTCTACGTAATTATTAATCTGCTGCACATCGTAAGAAACATCAACTA
TTGCCTCTGGAGCAGCAACAGCTACAGTCAGCAGGTAATCTCGCTTTTCCCTCAAATATT
CCATTCTGATTTCACGCAGTAACTGGGAGAAGTGTTGCCTCTCGCGACTTCCTTTCATTT
TATAAAGCTTGTGCACTTCTGGAAACTCCCAGTCTAAATCTATTCCATCTAATTTGTAAT
TTCTTAGAATAGTTTTGATTGATTTGATAAAAACTTTCCTAGAAGCATGATTGGCAACCA
TATCTCTAAAACCAGAAGCTTCTCCAGCACCTCCCACTGAAATCAATACTTTAAGGGCAG
GATTTTCCTGTTTGAGTTTGCACACTTCAGTTATAGTTTGGTATTGATATTCATCTAGAT
GTATCTTTTTGTCGATGACTCTTGCAAATGCAACATTGATGTGTGTGCACAGGTGAGGGT
CAATACTGGCTGGCAATAGTTGTTTGCCATCATTATCAGGTGTGTTGTAATAACAAGACA
CTACTGTATTACTTTTGATGTCTGATGTGACTGGGATGAAGAACACATTATCCTGACTTT
TGGAATGCAGCTGACCACTAAATACCAGAGTTAGCATCGACATGTATACAGCAGTTCCAA
GGACTATGAAAAGGCTCGCTTTCGTCAGAATTCCATCGTAATCTAAACGCATCGCTATAT
TCGTCTTGTTGCAACTAATAAATTGTAAATTCTATTTAGATGTTATCAGCTGTTCATAGT
ACATGGGATATGTTACACTCACAATAATTAACAGTATCTAATATTGTATTGATGAGATCA
TAGGATCATAGGTTTGTCATTTTCAATTTTGTTTTCGGAATGTCAATACACAATATATAG
TAGCAATATGGTAG
(2714 bp)

- SilkBase 1999-2023 -