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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23116_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		geranylgeranyl_diphosphate_synthase_[Choristoneura_fumiferana]
Ontology
GO:0004161 F dimethylallyltranstransferase activity
GO:0004311 F farnesyltranstransferase activity
GO:0004337 F geranyltranstransferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006695 P cholesterol biosynthetic process
GO:0006720 P isoprenoid metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0033384 P geranyl diphosphate biosynthetic process
GO:0033386 P geranylgeranyl diphosphate biosynthetic process
GO:0045337 P farnesyl diphosphate biosynthetic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.49 TPM:3.23
ORF Entry
Sequence
(Nucleotide)
CGGCAGAAATAGGCAGGGCGGGGGTACCTACCCGTGCGGACTCACCAGAGGTCCTACCAC
CAGTAATTTTCAAAGATGTCCTTTAAACCAAATAACCTTTCACTTCTCGCTTTAATTAAG
TTTCTGTTTTATAACATTAGCAAAAGTTTCGCTAAAATTTAAGGAACAAATTCAACTACC
CTCACTATTTGTATTTGGAATAATTTATATTTATAATAAATTAAGCTCATCTTTAGTTGC
GCTCAAACGTAGTTCATTTGATCGTTAGCGTCGTCGCCTTCCTGTCTCCAGGTGAGCAGG
TCGTCCAGCAGCGCCTCCAGCTGTGGGTTGCCGCCTAGACGGGACACCTCCTCCCTGGCG
CGCGCGTCCAGATCGTTCAGGATCCCCCTTGTGTACCGGAAGCTGCCCAACTTCTCCAAC
AACGTGATGCAGTAACGTTTCACTTCAACGTCCCGTGTCCTTTGGCGGAGGATATGAAGG
ACTTGTTTGTCGTCCTCCTGACTCCTGATGGCGTGTATGATGGGGAAGCTGAACTTCCCC
TCCGTGAGGTCCTCGCAGTAACTCTTGTTCTCTGTGTACTCCCTCATCGACAGGTTGCAG
TAATCGTCGCGGATCTGGAAATACAACCCCAACACGGCGGACAGATTGGTGAAGTCCGAT
TTGTTCTCGCTAAACAACTGCATCAGTCGTATCGCTAGCATGAACAGTCCACCGGTTTTT
TTGATGGTCATCTGTTTGTATTCGTCTTCAGAGGGACACTGGAAGTTGTCCCGCCAGTAA
ATCTCCATGCCCTGACCTCGATGCAGTTCCAACAGCTGTTCGGTGTACACAGTCGTTGCC
AATGGATGGCCAAGCTCCAAAGTCTTCTCGAGGGCTATGATCATAGCATAGTTCGCAGCG
TTGATGGTGCTCGCGACACCATAGATGGAGTGGGCTACCGGTATTCCGCGCCGTAAGATG
CTGTTGTCTTGAATGTCGTCGATCAATAAACTGGCATTGTGTAGCATTTGTACAATATCA
CCAACTAGTCTCAGTTTCTCTTCAGATATCTTGAGCCAGTAGTTGAATGCGGAAGCTAGC
TTCGTTCTTATCTGTTTCCCTGGTACTTGCTGAATGTATGTGTAAGGCATGAGAATTTTC
TCGCCGTGAAAAACTGTCAAGTCAGTCAGTAGTTCCAATTTTCCAACTGGATAGGCGATG
GTTTCACACTTTACAGCCCAATTTCATGAATTTTATTAAACGAATATGAAGCGAACAATG
TTATGGATGAAATTGAGCAAACACAATGCACTATTCCAA
(1299 bp)

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