SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23093_c3_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ecotropic_viral_integration_site_5_ortholog_isoform_X4_[Bombyx_mori]
Ontology
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006886 P intracellular protein transport
GO:0007298 P border follicle cell migration
GO:0017137 F small GTPase binding
GO:0030334 P regulation of cell migration
GO:0031338 P regulation of vesicle fusion
GO:0031982 C vesicle
GO:0032880 P regulation of protein localization
GO:0043087 P regulation of GTPase activity
GO:0055037 C recycling endosome
GO:0090630 P activation of GTPase activity
Transcript
Level		FPKM:0.40 TPM:0.37
ORF Entry
Sequence
(Nucleotide)
GAGACATCTTTGCTGAAGTTTGCTGTGTATAGTCTGTATTCTGAAGTATCTGGAGTTTTA
AATTTTGCCAGCTGGGCGGTTCCAATATTTATTTTATTTATGAAAAGAAAATAATTGTTT
TACGAATTAATATCGGAGTATCAGTTCCTGGAAGCTCTGAAGAATCAAATTATTTAATAA
ATTTAGTGTTATTCTGATACTTAATGACCGATCGGGCTTCAACTGAAAAATCTCCGGAGC
TCAATCCCAACGCAGACTGCCGAATCCCGACAAGTGAAACTATCCCGACGCCCGACCGGG
CGCTTCTCGCCAAGCTGGAGGAAGAAAACCGTCGTATCGAGGCTGATGCGAAGAACGCCT
CGCTCACTACCGTCCACAGTCGGAAGAGCTCCGACACATCACTGATATCCCTCGCTTCCG
CCACAAGCTCAAGTCATGAGGTCGAAACGCGCCCAACTCCTGGGACTAATGGAGAAGAGG
ATCTTTGGAGCCTCTGGGGTCGCCTCGTCAGCAACTGGGAATCGGAATGGAAACGTCGAA
ATCAATGGGTCCGCGACCTTGTTCGACAGGGTGTCCCACATCATTTCAGAGGCATCGTAT
GGCAGCTACTGGCAGGCGTAGACACGTCGCCTGAAAAGAAGTTATACGCCTCATATATTA
AGGCGAAATCAGCCTGCGAGAAGGTCATACGTCGTGACATCGCTCGCACATATCCCGAAC
ACGATTTCTTCAAAGAGAAGGATGGCCTCGGCCAGGAGTCTTTGTTCAATGTGATGAAGG
CGTATTCTTTGCACGATCGAGAAGTTGGCTACTGTCAAGGCTCAGGATTTATCGTCGGCT
TATTACTAATGCAGATGCCGGAAGAGGAAGCGTTCGCTGTTTTAGTTAAAATAATGCAAC
AACATCGCATGCGGGACATGTTCAAACCGAGCATGGCGGAACTGGGACTCTGCATGTTTC
AGCTGGAGAACTTGGTACAGGAACTGTTGCCTGACTTGCATGTTCACTTCCAATCTCAGA
GCTTCAGCACGTCTCTGTACGCTAGTAGTTGGTTCCTGACTTTGTTCACAACAACATTAT
CACTTCCGCTCGCTTGCCGTATAATGGATGTGTTTCTCTCTGAAGGAATCGAAATTGTTT
TCAAAGTCGCCCTAGCGTTGCTTACTTTAGGAAAAAACGATCTCTTATCGCTCGATATGG
AGAGCATTTTGAAGTACATACAGAAAGAACTGCCCTCGAAAGCTGAAGCGGATCAAGCCG
CTTTCATGAACTTGGCGTATTCAGTCAAAGTTAATCCGAAAAAGATGAAGAAACTCGAAA
AGGAGTACACGGTTATAAAAACAAAGGAGCAAGGTGATATCGCCGTGCTCAGGTGTCTTC
GTCAAGAGAACCGTCTTCTCAAGCAACGCGTAGAACTGCTGGAGAAGGAAAGTTCCGCTC
TAGCAGAGCGTCTGGTCCGAGGTCAAGTGGACCGCGCTGAAGGAGAAGAAGAAACCTTTG
CATTGGATCGAGAGGTCCAAGCGTTGCGTCGAGCTAACGTAGACATGCAGCAGCGGCTGG
CCGTTGCTTTAGATGAGATAAGATCTCTCGAGATGACTATCGCCGAGAATAATTCGAGGC
AGTCGTCGCTGGAGGGCACTGAAAGCGCCAGCGGTCAGAAACACGAGGAACTAGCGCGCT
GCCTGCAGAGGGAGCTAGTGCGGGCTCGTCTACACGCAGCGGAACGCGAGGCCGCCGAAC
GCGAACTGACGGCTCGCATCGACGAACTCGAGAACGAGAACAAGAGCCTCAGGAGACAGC
GCGTCGACAACAATGTCGCACACTTACAGGACGAGCTGATAGCCGTAAAGTTGCGCGAAG
CTGAAGCTAATCTCTCGTTGAAGGACTTAAGGCAGCGGGTCTCGGAGCTGTCGGAATCGT
GGCAACGACATTTGCAGTTATGTTCGCAGGAGCACAAGCAGGAAGCACCCGCTGCTCCAG
TTCAGTCGAATGTAGTATCAGACATCATGGCGACCCCGAAGAAACTGCTGCGAGCTTGGG
AAGGGAGGTCGGCTGATATGCTCAAACTGGACGAGGAACTCATGACCACCAGGATCAGGG
AGGTCGAGGCCTTGACCGAATTAAAGGAGTTAAGACTGAAGGTAATGGAACTAGAGACTC
AAGTTCAGGTGTCGACGAATCAGCTCCGAAGACAGGACGAGGAAGCTCGGCTGTTACGCG
AGAATCTAGATGCGGCGCTCCAACGTGAACGAGCTCTCCAAACGAGGCAGAGAGAGTTCC
AGCACAAATACGCTGATTTAGAGAGCAAGGCCAAGTATGAAGCGATGCAAGCTAACATTC
GAAACATGGAAGACGCGCAAAGAATAGCCGAACTGGAGACAGAAGTGTCTGAATATAAAT
TAAAGAATGAAGTCATGGCAACCGAAGGTGAACTAAGGAACAACAATATGGACGACTCCG
ACAGAGTACGTGAATTGCAAGAGCAAGTCGCCGAGCTAAAAGCGGAGATCATGAGGTTAG
AGGCGTGGAAATCTCGGGCTCTCGGCCACACGGAGCTCAGCCGCGCCATATCCCTGGAGG
ACGATTTGGAAGAAGACGAGAAACTCAAGTTGACACTGCGCCGAGAATCTTCTACATCAT
TAGAATTTACAACAACCTCACGCAAACCTTCGTAGCGAATACTCAGCACAGCCCTAAGAC
GACCAGATCGGTATATATTTTTTGCTCTTTCCATTGACTTAATATTAGAAACGGTCGCAT
CTGGTATTTAAATGAAGGCCTCAATCGTGGTCTTTCGTTTATGTTATATACACACAAAAG
TAAGAAACGCATATGACAACATAATATGAACCGAAGCTTTTTACGACATGAGCGCCCACG
ATTCGTTGATTATTTAAATAATAAGATAAGACCGAATGCACTTTTTATACTACAAAAAAA
TTTATCAATACTGTGATATATTATTACCGTGGTTTCAGTTCTGGTATATTTAATCAACAT
TTCTGCTGCTTTTGTTTAAGAATTATACATTTTTATCTAAGATCCACTTAAA
(3052 bp)

- SilkBase 1999-2023 -