SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp23044_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_3-ketodihydrosphingosine_reductase_[Amyelois_transitella]
Ontology
GO:0005615 C extracellular space
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0006666 P 3-keto-sphinganine metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0030148 P sphingolipid biosynthetic process
GO:0047560 F 3-dehydrosphinganine reductase activity
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:8.28 TPM:7.67
ORF Entry
Sequence
(Nucleotide)
GCCAGAGCCAAAAACTGAAGAAAAAAAAGTGTAATATCTATGATAGAAACGAAGCTCAAA
AATTAGCCTTAAAATTTGAGTAGATGTAAAGTGCTTGAAGTTATTTGTAAGAGAAAATAT
CGTAAAATGTTGCTAACAGTTGGAATTTTAATAACATTTTTAGTACTCGTCTTATCATTA
GTTTTATATTTAACAATAGAAAAAAAAGTTATTTACAAGGACTTGTTGAATAAACATGTT
CTAATTACCGGTGGATCTAGTGGAATTGGAAAATCCGCTGCTATTGAAGCTGCAAGGCGT
GGAGCTCATGTCTCTATCATCGGTCGAGACGAAAATAAACTTAAGTCAGCTGTGGAAGAA
ATAACTTCACAGTGTTTAGATAAGTCTGTTCAATCCATTAAATATGCAGTTCTGGATGTT
ACATCTGACTATTTAGTTATAGAAAAAGCGATAAATTCGTTAGAGGACAATGTAGGACCA
ATATTTATGTTGGTAAACTGCGCCGGCATGTGTATATGTGGTAAATTTGAACAAATGAAG
GTAGAGGATATAAAACAGATGATTGACTTGAATTATTTTGGCAGTGCTTATATGACAAAA
TGTGTGTTGCCGGGCATGAAGAAAAAAAAAGAAGGATTGATCGTATTTGTATGTTCAGAA
GCAGCTTTAATCGGCATTTATGGATACACAGCATATAGTGCTGGAAAATGGGCTGTGCGA
GGTTTAGCTGAGGCCCTGAGTATGGAGTTAATTGGAACTGGTGTCCGAGTAATGATATCA
TATCCTCCTGATACAGACACCCCGGGTTTTAAGAATGAAGATCTTACAAAGCCTTTAGAA
ACCAAACTTATATCAGGATCTGCTGGTCTACTTTCTCCAGATGTAGTTGGAAAGCAAATG
ATAGATGATGCATTGAATGGGAAAATGTATTCCGTGTATACTACATCTGGATCAATGTTA
ACAACACTGTTTGGTGGTTCAATTGATAGTGTATGTCAAATTTTACTACAAGTGTTTTCA
ATGGGAGTTTTACGTGCAGTTATGGTAGGGGTTCTATTGTCATTTCATAAAATTGTGCGA
GACAATTTAAAGTTGCAAAACAATAGCAAAAACAAATAAATATTTATCGGTGTAATTCTA
AGATAAATTTATATTGAATGTGAAAATATGTATGAATAATTAATTCCAGAAGAAAAAAAT
ACATGTAGGAAGGAGGAAAGGAAGTAAGGAAAAGTACACACATACATACATAAGGATTGC
TAATATTATACAGGGTGTTCCACATAGGGTATATATATCAAGCAATAAAAAGCTGCCAAT
ATGACGAAGTTTTTCTTTTTTATATTTTTACATTTTTGATACTACAGCTATATTTGGCTT
GAGCCCTTTTTGGGACACCATGTAATTTTTGTTATATTAATCATAGTTACTCAAAATGCT
GTTACTACTTTGTACTAAAAACAAAAATCGGACAGTATTTAAAAATACTCTACATACAAA
AAAACAAAAGGAGTACATTTAGGACCAACCAATTAGAATAACTTAAACATATATATATAC
CATATACAGCTATTACGAAATTTTGCATATACATATATGAAAGCCCAGAAAAGTATTTGG
TAGACAGTATTACCTATTTGTACTAAGTATTATTTCCAGGGGCTAGTATTTTCTTATACA
ATTGCGAGTGTAACCGCAGGTGAAAACTAGTTGTATAATATTTTTTGTAGGAGAAAAAAA
GATTGAAACAAAAAGATGAAGAAAAACAATTTAAAAATAGCTTTTAAACACTTTTAGCCC
AATTATTAGTCTGATTTGAAGATCTTCAAAGTAAAATAAACACACGTTCGTTAACTTATT
CAACACAAATCGTATCCAAGTATCTAGTAATCCAGTGTGCTTAGTGCGAGTTT
(1913 bp)

- SilkBase 1999-2023 -