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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp17945_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		alanine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004813 F alanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006419 P alanyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0043039 P tRNA aminoacylation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:24.34 TPM:22.53
ORF Entry
Sequence
(Nucleotide)
TTCACAGTTTATTTATATTTTGACAAAACAATATTCACATAATATATTATATTTATGCAC
GTGTTGTACGTTCATTTAATTTAACTTAGACTTAGCATATTCATTTGCAATTTGGATAGC
TTCATTTAAACTATTAGGATTGTTCCCAGATGCTTGAGCTGACTCAGCTTTGCCACCACC
TTTGCCACCTATAATGTCTACAACGGATTGCACCCATTCTGAAGCTAACAATCCCTTTTC
TACATCACTTTTGGGCACAGCTGCCAAGCAATAAATCTTATTAGCGTCTTTATCAACAGA
AAAGAACATCGCAGCTGAGTTTGGGATAAATTGTTTCACTTGTTTTAAAGCACCATCTAA
AGCTTTGGTATTTCCAAACGCCTTTAATTCGGATACAATATATTTTGATTCTTTGCGTTC
AAGACATAGCTCTTTTGCTTTTTCTGTGACTTGAGTAATAATTATAGCTTTTTCGGCTCT
TTCTTTATCATCTAGTTGTTTTTTTAAGTTCTTCAGCATATTTCTTAATTCATCTTTTTT
CCAATATGATATTTGGGCTTGGGATATCTCGTTCGTCAGATCCACTATTTTCTTAGATAC
TTCTTTATGAGAAATACTTTCATTTTGTTCTTTTATAAAATTGGCAACATTATTAACCTC
GTTTTCAAGAACACTTAATTTGTTGATAGCTTTTATCGCTTCTGGTCCAGTCACTGCAAC
AATTCTTCTGATTCCTTTTGCAATACCTTCTTCACTCACAATGACATATTCCCCAATATG
GCTAGTCCGGTGTAAGTGGGATCCACCACAAAATTCAACAGATGTTTCGAATCCTGTAGG
AGCGTCTGGATTTTTTATAAGGTCTTCCACGGGTACTCCTACTGATACGACTCTAACTGG
ATCAGGATAATGTTCATCGAACATTGCCCGCAGTCCGTTAATTTTTTTTGCTTCAGACAA
GCTTGTGTAGTTTGCGTATACTGTTTTATTTTTCGCAATGATTTCTTTTATTTCGTTTTC
CGTATCTTTGATCTGTTTTATTGTCATGGGACCTTTATTAGTAAAATCAAATCGAAGCCT
GTCTGGCATTACTAGCGATCCACGTTGATCTGAATCGTTGCCAAGAACTTTTCTTAGAAC
GTTATTAAGAACATGGGTTCCAGTGTGATTATTCATAACAAGTCTTCGTCTTTCTGTATC
AATGTGCAGGGATAGAGTATCTCCTACTTTTAAAATTCCCTCGACCTTTCCTGCGTGGAG
AACATAGCCTCCTTTTACTTGAACATTTTTTACTGTAAATTCAACAGTTTCGTCATCAAT
TTTTACCATATAACCTTCATCGAAGATTTGGCCTCCTTGTTCAGCATAAAAGCTAGTGCG
ATCTAGTATTACACCACATTCCTGTCCTGAACTTATTTCACTTACAAACTCCTTATTTTT
CCTTAATGCGACAATTTTTGCTGTACACGGAGCAAATGTATAGAGTGCATCTTTGTCAGT
AGATGATGGTAAATAATTATATTTTGGAGAATCATCTGTAGCAGGAATTCCAGTATCCTG
TAGATGACTAATAGCGTGTACATCTAATGCTATCAAGTCTTCCTGGCCTGCGGTTTTTCC
TTGTGAAACTAATTGAGATTCTTTTCTGGATTTTTCATAACCTTCCATGTCTACATTAAG
ACCCTTTTCTTCACACATTAATTGAGTCAAATCAATAGGAAATCCGTAAGTATCATATAA
ACGCCATGCCACGTCACCAGGTAAGGTTTTCGAATTATTGAGCTTCTCTATTGTTCTGTA
AAGTAAATTCCTTCCTCGCAATAGGGTTTTTAAAAATTGCACTTCTTCTTCATTTATGAC
ATGCACAATGGAATCTGGATCCTTTTTAATTTCTGGGAAAACATCACCTAGTAATTCAAC
TACAGTATAAACCAAAGATCCAAAAAATCCAGGCTTGGCATTTAATTTTTCTGACGCATA
TCGCACAGCTCTTCTCAAAATTCTACGAAGAACGTATCCTCTACCTGTGTTATCAGGGCA
ACCACCATCTGATAAAGCAATTGTTAGAGTTCTAGCATGGTCAGCCAAGACACGATACGC
CATGTCTATTCCATCAACATCATCAATCCCAACTTTTCCAGAATATGGTCTCACACCAGT
AGCGTTTTCAATAGCTTTGAATATTGGCATGAAGAAATCAGTATCATAATTAGCTCGTTT
GTTTTGAATTACAGATACTAACCTTTCAAGACCTAAACCACAATCTATATGTTTTTTTGG
TAATAATTTCAGGGAACCATCTGTTTCCCTATTGAATTGGATAAACACTAGATTCCAAAT
TTCCAACACGTCTGGATCATCCATGTTTACAAGATGGGCAGCTTCTCGTTCTCCGATTCG
ATCATAGTGTAGTTCTGAACACGGGCCACAAGGACCTGTTTCACCCATTTCCCAAAAATT
ATCCTTCATGCTTCCAGGCAAAATGTGTGCCTCTGGGACTCCCAAGTTTAACCAAATGTT
TTTGCATTCGAGATCAGGTTCAAGACCAGATGAAGGGTCTCCTCCAAAATATGTTACATA
CAATCTCTCTCTAGATAATTTAAAAACATCAGTTAATAGTTCCCAAGCCCAAGCACATAT
TTCTTTTTTAAAGTAGTCACCAAATGACCAGTTTCCCATCATTTCAAAAAATGTATGATG
ATATACATCTTTTCCTACGTCATCCAAATCATTGTGTTTTCCACCTGCTCTAATACATTT
TTGGGTGTTAACTACTCGAATATACTGAGCCATATCAGAGTTTGGATCTACGGAACCTAA
GAAAATTGGTTTAAATTGATTCATCCCTGCATTTGCAAACAGTAATGTCGGATCATCTAA
GGGTATGGTAGACGAGGAATGTACATATTTATGACCCTTTTTAATAAAAAAATCAATAAA
GGTCTTTCGTATTTCATTGCCAGTCATAGAAGTATCCATTTTCAGTTTCTTTCAAATCAG
CACTAAAAATCCTTACAGAAAATAAAAAGTTTGTATCGCAGCTAACAACTTACAAATTAA
CGATAGTTATTCGCAGTGTTCACAAATAAAAAAGTTGAAATGTGATATTGACATTTGACA
ATACTAATTTCATTCACCG
(3139 bp)

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