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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp174191_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_intron-binding_protein_aquarius_isoform_X4_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:1.54 TPM:1.42
ORF Entry
Sequence
(Nucleotide)
GTTGGCGGCGCGGTACTCCGGGAGCTGCGTCACGTGGCACAGGTCGCCCAGCGCCCGGTA
GCGCCAGCGGTACAGGTTGCAGATGCTAGGTCTAGCTCGACCTTGTGCGTCCAGTTCCAC
GTACGGAACACCCAGTCTGACCATTCTGGTGAACAGGCTCTGTTCCATGTTGCAGTACTT
CTGGAACGCCATGTTCTTGACGACCGGGGGCAGCTGGTGGTGGTCGCCGATCATGATCCA
ACGCTTCAACCGGGACCTGCCGTCCTGCGGGTTCTGCAGCAGCAGCGGTATGAACGTCTC
GATCTCGAGGATTTGAGCAGACTCTTCCATCAGTATGTTGTCGTATTTGAAACCCATTTG
CACTAATTCGGAACGTTTGAGGGCGGCGTGCGTGCACGTCATCGCGATTATTTTCGCTTC
TTTGACCAACAAGTACTTGGACCGATCCAGTCCGGACCTCAGTAGTTCGAAGGCTCGGAA
CTCTTCCAATTCCTCGAATATGTGATCAATATACCTGTAACAGCTTTTGGCTATTTCCAT
GTCCTCTTCGTGAGACTTCCTCAGGAACAAGGGTTTCGGGGCATCATCGAAGAATTCGTG
GAACGGAAACTCCTTGCTGACTATCTCAATCGAGTTTGTCTGTTGCTGACAGTTCTCGAG
AAAGGCTCGCCAGCGCGGCCGCACGTGGT
(689 bp)

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