SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp17269_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_rab_GTPase-binding_effector_protein_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008270 F zinc ion binding
GO:0008289 F lipid binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030100 P regulation of endocytosis
GO:0031901 C early endosome membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.99 TPM:2.77
ORF Entry
Sequence
(Nucleotide)
CAGGCCAGCGCCGCCGCCCAGCGCGCGCTGCACCACGTCACCCTGCTCACCGTGGACCGG
GAGACGCTGCAGGGGAAACTGGACAGCTTAGAAAGAGACAACGCGACGCTGCTGGGCCGC
TACCTGAAGAAAGCGGAGGAGATGCAAAATGAAATTATCGATCTGCCCGACGACGTGCAG
GTGCCCGCCAGCCTGCCGACTGTATAGTGTAGCCACGGCTCGGCAGCTCCGAGGTCATCC
CGCGCTAGCGTTGAGGGGAACTGACCAGTGGGAACCTGACCTGGCCACGTCGCCCTGTTC
CTCCACCGAACCCAACGTTTGAAGGGACTCTTGTTGGATTGTGACACCTAATAAAAGAAT
AAAATCAAGAAGAAATCCGGACTGTTGGTAAATTCATTAATGATTAACTGGATTACTGTC
ATCTGTTGCCAGGAGCTGCAGGAGCTGACCCTCCGTCTCCGCGAGCAGCTGATCTCGTGC
TGCCTGTCCCGCGAGCAGGCCGCCGCCGTGGAGCAGCAGCAGCGCCTCCAGCTGCTGCAG
CAGTCCACCGCGCTCCAGCAGCACGAGGAGAGGGCGGCAGCACTGGCCGCGCAGCTGCAC
GCCGCTCAGGAGGAGCTGGACAAGCTGCAGACGGAGCGGTCCCAGATGAACGAGCTGGCC
GACAAGCTGCGGCACTCCAACGACATGATCGAGGGGCTGCTGGAGGACAAGAAGCGGCTG
CAGTCGGAGGCGGCGGAGATGCGCAGTCGTGTGGCGGCCCTGCAGCTGGAGCTGGACAAC
AGCGAGAAGGTGCAGCAGGACTTCGTCAGACTGTCGCAGTCTCTGCAGGTGCAGCTGCAG
CGCATCAGGGAGGCGGACACGGAGGTGCGGTGGCAGCACGAGGACGACGTGCACGAGTGT
CCGTCGTGCCGCCAGCCGCTGCCCAGCAACAAGAAGAAGGTGCACTGCCGACACTGCGGG
CGCATCTTCTGCGCGGCGTGCGTGAGTGCGCGCGTGCCCGCCG
(1003 bp)

- SilkBase 1999-2023 -