| Name | A_BomaMG_comp17152_c0_seq2 |
| Scaffold_id | |
NCBI non-redundant
(nr) | PREDICTED:_pre-mRNA-processing_factor_39_isoform_X2_[Papilio_polytes] |
| Ontology |
| GO:0000243 |
C |
commitment complex |
| GO:0000381 |
P |
regulation of alternative mRNA splicing, via spliceosome |
| GO:0000395 |
P |
mRNA 5'-splice site recognition |
| GO:0000398 |
P |
mRNA splicing, via spliceosome |
| GO:0005634 |
C |
nucleus |
| GO:0005685 |
C |
U1 snRNP |
| GO:0006396 |
P |
RNA processing |
| GO:0006397 |
P |
mRNA processing |
| GO:0008380 |
P |
RNA splicing |
| GO:0030627 |
F |
pre-mRNA 5'-splice site binding |
| GO:0071004 |
C |
U2-type prespliceosome |
|
Transcript
Level | FPKM:1.02 TPM:0.94 |
| ORF Entry | |
Sequence
(Nucleotide) | GCCGGCCGCGTCCCGCACCTCGCCCCGCAGCCGCACCAGCTCCGCGTGGCTCACCACGCC
GGTCACCGGCTCCGACATCACGTGCTCCTGGAAATTGTCGAAGTGTGACGTGTACCCTAA
GGTGGGTGTTGCCAAAAGACGATCGTAGATATTCGTGACATTGAGAGCGGAACCATTTTC
CGCTTCCCATTTGATGTAAGACTCCCAAAGACGATCCGAGCGAAATTCTAGTCCACATGC
ATCTATGGCTCGTTCATACTGAGATCTGATGTACGCATGATCTTCGGTTTTAGTCGCTTT
TATATGATTGAGGTAATGTATCCAGAGGTCTACGGATAAAGGTATAGCTTTAAGTCCCCT
TTCCAAAACCTGAAAATCAAGATTGAATTTGAAAACAATTTCCAAGAGCGTCCAAGCATT
GTCGTGGACACAACAATACTATGATAGCAAGGGAATATTCAATAGCATTATATCATAATA
TTTTTCATTCAATTTTTTAAAATAGAGGAAGCGAGAGGTCGGGTATGTGCGCCTATTTGT
TCGAAGCAATAAATACACCAACGTAACGCAACATCTCGCTTTATCTATTTAAAATAAAAT
GTTTGTTCGGGCATATTACACCTGTTCGTAATGGACGCTGCCGGGCTCGCTGTCTTCGCC
GTGATCTTCGAAATGGCTAAATATGGAGAACCGCTGTGATCCACGCTAGTGTGCTTTCAT
GGATTAGTTTCATCTTAATTATCCATAAATCATTATGTACTTAGTTATATATACAATAAA
GTATGTATTACAATACATCATGCATGTACAAGTTGTATTAAACTTAATCACTAGAATACA
AACAATACACCTTATCGTAAGTATAATTAAAACAATATCTATGTGACGGTTATACAACTC
TCCGGTGTGACCTGACGTCTTTCGTATACGAACATCGTAGACCTCGTTGCACTCTAAGCA
CTTCTTTTTACTTCCTTTACGTTTTTCATAATCTGCAAACTTTCTCCAATATCCATAGCA
ATAAGGATAGTGGGATAAAAAGGCGTCATAGGCTTCACGTGCAGCTTCAACATCGCTCTC
TTGGTCGACATATTGTAATAGGTAGGTCCACCCTGTGAAGTCAGTCGGATCATCGTTCAC
AACTTTCCAGTACTTTTCCAATTCCGGTAAAACTTTCTTTTTAGGTTTTTCATCAATAGA
AGGTCTCTTTTCGGCAGGTATGGGCTTGCTTTCGCCGTTCTTGGTAATAGCTTGTTTTTT
TGTGGAAGATTCACCTTCTGATGTTGGTGATCCTGGATCATAATTACTTCTCTCTTCATC
TGGTTTTCGTTTTCTAGACTCTTTCTTGGATGCAGGTAGCTCATCTTCTGATACAACCTC
TGTATCAGCAGGCAGTTCTGCAGGTTTCGGCCCCGGCAACTCATCATCAGATACATTCTC
AGCATCTTTGATGCTCGGCTTTTGCACTTCAGGAAGTTCATCCTCTGATACTACTTCTGT
TTCTTCAGCACCACCAATCTTACTTGCGGAGTCTTGTGATTGTTCTTTGATATCATCTAC
TTCTCTTTGGTTTTTCAACTCTTTGACTTCATCCTGCTTAATCACTGGACCTTTTACTGG
ACTGCTACATGGCTCAACAATTTCCAATTGCTCTGATTTATCCACATTTAAATTTACATG
CTCAGTGGCGAAGTTAGAGTCATTGCCAGAGTTTTCATTTATCTCGCCTATATTGGAATC
TGTTGCATGTTGACTTTCGGACTGCCTACTGTCTGTGTCTAAAACTGCTTTGTGGGATGC
AGAGTCACTTTGAATAGAATTATCTTCAGTCAATGCGCTATTTAGAGAATCATTGGGAAA
AGTTACAGCATTATCACCAATGTCAAAAGAATCTGTACTGAAGCGAGGGCCGTTGTTTTC
GAGGTAGTCACCAGCGCTTCCAGCTGATAATTCCACGGCGTTCAAGAAACATTGATTAGA
TGTCGACGACTCATCAACAGCAGCATCGACACTATTAAATTCGCCCTCTGTTAACAAATG
AGAAAGTCCGTTGGAGTTCTCATTTATCAAAGGACCTTCGTCTGTATCCATGGGATTTTC
AGATCCTTTCTGATTATCGGAGCTTGTTTCATCTTCCATGTTTCAAGTTTAGAAATCTGG
TAGAACGAGATATATCGATCAAACACTACAATCTAAGCGAAACAGCTATAGTAGTAGTTT
GAGTTGGAAAAGTATTTAGTCGCTACGTTTTATTTCGTATTTGGACGCAATTTGCTATAT
TTTATCGCTTTTTGAGCTTTTAGCTTCTCTCCAAATACGAAATAAAACGTAG
(2332 bp) |
