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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp16849_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_lysine-specific_demethylase_lid_isoform_X2_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016577 P histone demethylation
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0032453 F histone H3-methyl-lysine-4 demethylase activity
GO:0032922 P circadian regulation of gene expression
GO:0034647 F histone H3-tri/di/monomethyl-lysine-4 demethylase activity
GO:0034720 P histone H3-K4 demethylation
GO:0034721 P histone H3-K4 demethylation, trimethyl-H3-K4-specific
GO:0043970 P histone H3-K9 acetylation
GO:0043992 F histone acetyltransferase activity (H3-K9 specific)
GO:0045475 P locomotor rhythm
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070822 C Sin3-type complex
Transcript
Level		FPKM:4.95 TPM:4.58
ORF Entry
Sequence
(Nucleotide)
CGAAAGTTCAATTTTGCATGGCGGACGTGCAATTGGATTGTGTTATTTGTTGGTGATCAT
TTTAATAATTTATCTCTTGTAGATTCCTTATGGAAAGACTACTTTTAATAATTTTATTCC
TTTGTGGTCGTGCTTTATTCATCCCTTAACGATAGATGATGCTAAAGTGTTATTTATAGT
TGCATTTTGTGAGAACTGCATAGTGTATCTCGAAAATGGGAAAATGTGACGAAGCTAATG
TCGAAGTTAGCATGGGGGACTCAGCGTCCCCCATGAAACCTGATAATTTTACGTTTACTC
CACCTCCAGAGGCTCCTGTCTTTGAGCCTACACCAGAAGAGTTTTTGGACCCTTTAGCGT
ACATCAGTAAAATACGTCCTATCGCCGAGAAATCGGGCATTTGCAAGATAAAACCACCAG
CGCACTGGCAACCCCCATTCGCAGTTGATGTGGACCGACTACGGTTTACACCGCGAATAC
AACGGTTAAATGAGCTCGAGGCAATAACGAGGGTGAAGCTTAACTTCTTAGACCAGATTA
TAAAGTTTTGGGAACTGCAAGGGTCAACGTTCAAAATCCCGACTGTCGAAAGGAAACCGC
TCGACCTCTATTCGTTGCATAAGATTGTGAAAGAAGCCGGTGGCTTCGAAATATGCTCAG
CAGAGAGGAAATGGTCGAAGATAGCCCGCCGCATGGGCTACCCGCAAGGCAAAGGCGTCG
GTTCAATATTGAAGAATCACTACGAACGCATCCTGTATCCTTATGACGTGTTCAAGAACA
ATGGAGCAGTCGGAGACAATAAGGAGACAAAAATCGAAGTCAAATCAGAACAGACCCCCG
AGAAGGCAACGGCGACGCGCAGTCGCTCCACAACCAAATGTCCCCCTGGGGCCGCGGCCA
CCCCGCCCCCCGCCCGTCGGTACAAGTCCGAGCCCGAACCGGCGGCTGAAGGCAGTCACA
CCGAAGGAGCCCTCGTCGGATCTGAAGATTCGATCATGAAAACTCCCATTAAAGAGGAGA
ACCCCGAAATAAGGCGGACTAGTCCTCGTGAGAACAAATGGATGTCGGCGGGAGCCAGTT
GCGGTTCGCGTGCGCGGGTGACCCGTTCCACCCGTCTCCGCGAGCATCGCGTCAACAACA
TGACGGTCTCCGTGACGCCCGCCCCGCCTGCACCCAACACGCATCCCGATGATCCGTTGG
CGAAGTACATGTGTCACGTGTGCGGCCGGGGCGACGTCGAGGAGCAGATGCTGCTGTGCG
ACGGCTGCGACGACTCGTATCACACGTTCTGTCTGGTGCCGCCGCTCGCGGACGTGCCCA
AGGGCGACTGGAGGTGTCCAGTGTGCTTAGCTGAAGAGGTATCGAAGCCGACCGAAGCTT
TCGGCTTCGAGCAGGCCACCCGCGAGTACACGCTGCAACAGTTCGGCGAGATGGCGGATC
AGTTTAAATCGGATTACTTCAACATGCCCGTACACATGGTTCCAACGTCGACCGTGGAAA
AGGAATTTTGGCGCATCGTATCGTCGATAGACGAAGATGTCACGGTCGAGTACGGAGCGG
ATCTCCACTCAATGGACCACGGCTCGGGGTTCCCGACCAAGTCCAGCGCCCACCTGTACC
CGGGGGAGCAGCAGTACGCAGACTCCAGCTGGAACTTGAACAATCTACCGGTTCTAGAGG
GTTCTGTGCTGGGACATATCAACGCTGATATATCAGGAATGAAGATACCTTGGTTGTACG
TGGGCATGTGCTTCGCAACGTTCTGTTGGCACAACGAGGACCACTGGAGCTACTCCATCA
ATTATTTACATTGGGGAGAACCTAAGACATGGTACGGAGTGCCAAGTTCAAAGGCCGAGC
AATTCGAAGCCGCAATGAAGGCCGAAGCTCCAGAGCTGTTTCAGCTGCAACCGGATCTAC
TGCACCAGCTGGTCACGATCATGAACCCTAATGTGCTGATGAAAGCTGGTGTTCCCGTTT
ACAGAATGGATCAGCACGCTGGAGAATTCGTGATTACGTTTCCTCGCGCTTATCATGCCG
GCTTCAACCAAGGCTACAATTTTGCCGAAGCGGTCAACTTTACTCCCGCTGATTGGTTGA
AAGTGGGCCGCGAATGCATCGCGCACTACTCCACGTTGCGGCGCTACTGCGTGTTCTCCC
ACGACGAGCTGGTCTGCAAGATGGCGCTGGAGGCCGACTCGCTCAGCCTCAGCGTCGCGC
TGGCCGCCTACCGGGACATGCGCACCATGCTACACGACGAAAGGAAACTCCGGAAGGGAC
TGCTGGATTGGGGTGTAACGGAAGCGGAACGCGAGGCCTTCGAGCTGCTACCAGACGATG
AGCGGCAATGTCACATGTGCAAGACGACGTGCTTTCTGTCGTGCGTGACGTGTCGCTGCA
CGCCCGCCGTCGCCTGCCTGCGACACTACGTCGAGCTGTGCAGCTGCAGCCCGCAGGCGC
ACAGGCTCAGATACCGTTACACCTTAGATGAGTTGCCAGCGATGCTGGAGAAACTAAAGA
AGAAATCAGAACAGTTCAGGGAGTGGGCTGAAGCTGTGCAGAATGCTCTAGATCCAGATA
CGCCTAAGACTTGTGATTTAGACGGATTGAGGGCGCACTTGAAGAAAGCTCACGAACTTA
AGATTCACAAGACCGAACTAGTTCGTGCTTTAGAAACAGCTATCGAAGACGCCGAAAAGT
GTGCTTCGGTAATACAGCAACTGGACTTGAACAAGATGCGAACTCGAACCCGACACCACG
ACCCCAAATACAGGCTGACCATACACGAGCTCACTTTGTTCGCGGCAGAAATTGACGGCC
TCGCTTGTGTTTTGCCCGAAGGCTCGGCTGTCAAAGAAGTCTTACGTCAAACATCAGAGT
TTGAGTCGAAAGCATCGGAATTGATCAATAAAGACCTGGACAAGATTGAACCTGGCTACG
TTAGGGAATTAGAAGAGGTTGTAGATCTAGGATCCCGGCTCTGTATAGTGCTACCGCAGC
TGGCACCCCTGCAGGCACGGCTCCAACAAGTCAAGTTCGTCGATGAAGTGCAGCAATACA
GGGACGAGTGCTCCACCCTCACTCCGGAGGTCATCGACCGGCTGTTGCAGGATGCCGAAA
AACTTGTTCCCCATCGCAGGGTTGAACTGGAGAGGGCTGGACTATACAAGTTGAAAGCCC
TAGTAGAAGAATGGGAGGAACGCGCCCGAGCAGTCCTCATAGATACAACAAAGTCGAAAG
ATTCGTCTGAAGCGGACGAGCCGCAGTACACGACCCTGGCCGAGCTGAGTCTGCTGCTCG
CCGACGGCGACGAGATCGAGGCGGCTCTGCCCTCGTACCACGCGCTGCAGACCGCTGTGG
CTCACGCAAAGGACTGGCTGGCCAAGGTAGAAGAGATGCAATCCAAAGATCTGTACCCGT
ACATGCACAGCGTGGAGTCTGTTGTACGCCGCGGGCAACAGATCCCTCTGGCGCTATACG
AGAAAGATCAGTTGGCGGCCGCGCTACAGTCTGCGAAGGAATGGAAACGTGGTGCGGCCG
AAATGTTTCTAAAAAAGAATTGGCCATATTCGTTACTGGAAGCCCTGTCGCCAAGGACTG
AAGGAGCCGAAAGCTTATCAACAGCGCGGCGCCGGGCGCGAGCCGCCGTCGGAACCGAAC
CGCCTCCCTCGACGTTAGAGGCCGGCCTATTCCTGAGGAACTTCAGCGAAGACTCCACCC
CCACAGAAATCGTAGCGGCGTTCAAACAAGCGGAGATTACTGAACTCAATTCAATAAAAA
CTTTAAGAGCCCGTAACATGAGGAAGGAAGTCCGGGCCCCACCCGCGGCAGGCGTCACGT
TTTGCGTCTGCCAGAAACGGCAATATGGTGTCATGACCCAGTGTGAGCTGTGCAAGGATT
GGTTCCATGCTTCGTGCATATCGTCAATGAAGGACGAGCGGGAGGAGTCGCCGGACCGCG
GGGAGGGCGCTCCGTTTTCGGGAGCCGAAAGTAAATTCCTGTGCCCGGACTGTATGAGGA
CCAAACGGCCCAGGCTGGACCGGATCTTGGGGCTACTGGTGTGGCTGCAGAAGCTGCCGG
TCCGGCTGGCGGAGGGCGAGGCGCTGCAGTGCGTGACGGAGCGCGCCATGTCGTGGCAGG
ACAGCGCGCGGGCGCTGCTGGCCGCCCTGCCGCACCGCGCTGATATGACGAACAGAGAAA
AGGCAGATAAACTGAATGCTGAGTTAAAGAAGGCAACAGGAAGAGCTCATGATCTCCATA
ATGCGCATAATCCAAGGTCGTCGGCCAGCGTGGAGCACGCGTACAGCGCCACGCCGCGGT
CGCCCAGCGCGAGGATGGCACCCG
(4344 bp)

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