| Name | A_BomaMG_comp16757_c0_seq1 |
| Scaffold_id | |
NCBI non-redundant
(nr) | putative_UPF2_regulator_of_nonsense_transcripts-like_protein_[Danaus_plexippus] |
| Ontology |
| GO:0000184 |
P |
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
| GO:0001889 |
P |
liver development |
| GO:0003723 |
F |
RNA binding |
| GO:0005515 |
F |
protein binding |
| GO:0005634 |
C |
nucleus |
| GO:0005737 |
C |
cytoplasm |
| GO:0005829 |
C |
cytosol |
| GO:0006406 |
P |
mRNA export from nucleus |
| GO:0031100 |
P |
animal organ regeneration |
| GO:0035145 |
C |
exon-exon junction complex |
| GO:0042162 |
F |
telomeric DNA binding |
| GO:0048471 |
C |
perinuclear region of cytoplasm |
|
Transcript
Level | FPKM:7.21 TPM:6.68 |
| ORF Entry | |
Sequence
(Nucleotide) | ATTTATGACACCTACTTACCCAATGTTTGTAAATTTTTAAAGGAATTAAATGTGATTTGC
TGAGTTAATAAATGCAAAACAAAGTTGCTCACACCATATAGTGGTGTCCGTTGGGTTCAA
ATAGTACCTATATTAAAGATAAAATGACTGCCACCAACAACGATGAGCCAAACGAAACAC
CTACTGAAGAACCGTTTAAAGATTTAGAAGAAAATGAGAAAGCTGCTCTCGAAGAGTATA
CAGCTAACTTGGAAGCCAGATTGAAACAAAAATATGAAATACGTAATCAAAATTTGAATT
GCACTCGACCACCAGAAAATTATTTTTCCAAGTTAGATTCAGGTTTGAAAAAGAATACCA
CATTTGTAAAAAAACTAAAATCATTTAGTGCTTCTCAGCTGGATGTACTTTTGAAAGATT
TTGCAACATTAAATCTTACAAAATATATATCAGAAGTGGCTGCTGCAATAGCAGAAGCAA
AATTGAAAATGTCTGATATTCCTGCTGCAATAACTCTATGTTCAGTTCTTCATCGTACTT
ACGCTGATTTTTCATCTAACTTTTTTGAAAACTGGCAAAAGATTTTAACATTCAAAGCGA
CTGATAAAATAACAAATTCATCAAAACTACGGGTGGATATAAGATTTTATGCAGAATTAG
TGGCTGTCGGTATTTTTATGAATAAAACTGGATTGCCTTTGCTGGGTAATGTATTAACTG
TTCTAATAAACATGGACAAAGAAGAGCATAACAATATACCAATTTTGTTATCATTTTGCA
AACACTGTGGTGATGATTATGCTGGACTTATGCCTAAAAAAATACGAGAAGCTTCTGAGA
AATATAATATTCCTGTTCCTCGAAATACATTTTTACCGGCAGAGAAACAAACAGCAGTTA
GAACTCTCTTGAAAGATTACTTTCTTTCACTAACCAAACATCTGCTGGCGGAAAGAGCCC
AACTTCAAGCTCTGCATGCAGCAAATCAGAGGACTCTGCACACCAGAGGAGAACTCTCAC
AAGAAAGAAAAGAACAATTAGAACAACATCAGACAACTTATGACAAGCTACTAGTAAATG
CACAAAATTTTGCTGAAGTTCTTGGTGAAGATTTGGGTGAAGCTGGTGAACCTCCCACTT
TGTCCCTGACTGTTATAGAGACTCAAGGAAGTGTAACCATTGGTGGCAATGAAGACATCA
CTATGCAAGCCGGTACTGATCCTTGGCAGGACGAAGATTCTAGAACATTCTATACATGCT
TGCCTGACTTAAAAGTTTTTATGCCTAACTATCAAATGAAAGAGACTGTGAAAAGCAAAA
CTGAAACGGTAACAGAAGAAATGCTAGATGAAGATTTGAAGGAGGATGAATTAAGTGACA
ATGAGGACCCATCTGTAGTTCAAGAAGTAGAAACTGAAGAAATACAACCACCAAATGTTT
CCAATAAACATGGATTAGATACATTTTTGAATGAACTTCCCAACTGTATCAACCGAGAAC
TCATAGATAATGCAGCAGTTGATTTTATCCTGAATCTCAATACAAAGAATAATCGGAAGA
AACTATCAAGAGTTCTCTTCAGTGTTGCCAGAACAAGGCTAGATCTGTTGCCATTTTACT
CAAGATTTGCTGCGATTTTATATCCAGTACTGCCAGAAGTTTGTGTTGACCTGTGTCAAA
TGTTAAAACAAGACTTTAAGTATCATGTCAGGAAAAAGGATCAAATAAATATTGAATCGA
AGATAAAAGTGGTGCGATTCATTGGGGAACTGGTTAAGTTTAATTTGTATTCGAAAATGG
AGGCGCTGTACTGTTTGAAAGTGTTGCTGCATGATTTTAAGCATCACCATATCGAGATGG
CTTGCAATCTGCTTGAAACGTGTGGTAGATATTTATACTGTAATCCAGATACACACCAAA
GGACTATGATATATTTACAGCAAATGATGCGAAAAAAAACTGTTTCAGCTCTAGATTCGC
GATATGTAACACAGATAGAAAACGCATTCTATTACGTTTGCCCTCCCGAAACTCCTGTTC
AGCCTAAAGAAGAAGAACCACCACTTCATCAATTTATCAGAAAAATACTTCATGAAGACT
TGCAGAAAAGTAATGAGGAAAAAATTCTTAGGTTAATGCGAAAACTGAATTGGGATGACC
CGGAGGTATCCGCCATTGCCATACAACATCTCGCAGGAGGTTGGAGGGTGAGAGCAAGTG
CCAGAAGGGCTCTGGCCAGACTGACAGCTGAACTGGCAATCTGGCAAGAAGTAGTAGCTC
CAGCAGTCGTTGACACAATATTAGAAGAAATAAGGGTAACAATGGAAGACCCACATCCAA
GATATAATCAAAGAAGGATAGCTACTGTTCGGTATCTCGGAGAACTCTATAATTATAAAC
TATTAGATTCTCGAGATGTTTTCACTGTTTTATATTCATTTATAACATTTGGTGTCACCA
ATGATCACAGCAGTGTATCTGTGTTGGACCCATCTGATAATGTTTTTAGAATAAGACTAG
TCTGCGCTCTGCTTGAGACTTGTGGTGCATACTTCAACAGTGGTTCGAGCAAAAAAAGAT
TAGACTATTTTTTGACCTTCTTCCAAAATTACTATTGGTTCAAGTTCTCTGATCCGATAT
GGACAAAAGACTATCAGTTCCCTATTTACGTTAAATATATTTATCAAGAATGCCTGACGA
CTTTACGCCCTAAGTTGACTTTGTTTACGAGCTGGCAACAGTGTAAGGATGCAATAGATG
AGCTACGACAGACTTTATATCCGGAGCTAGGAGAGGAAGAGTACGATAATGAGGATCAAG
GTGATGACAGTGTGAACGACGGCTTAGACACAATTATGGAAACGGATGATGAAACGGACA
ATCCGCAATTGCCTGATGAAAGCTCTGATGAAGAACCGATTACCGAAAATAATGTTAATG
ACGAAAACGAAATGCAAGATGAAATGGCAATTGAGCCACGAAGACCTGCTACTAAACATG
TAGAAGACGTTGAGTTCGAATCGGCATTCGAGAAAATGGTAACAGAAAATATTGCAGAAA
GACAACGGGAGAATAGACCGCAACAACGCGACATTGCTGTCCCGATGACCTGCAGACAGA
CTACGAAGAAGACGTATGAACAGCTCTTGCAAGGAAAAGAGGGTGTGGAATTCGTTCTTA
TGGTTCGTAAAGGAACGAAACCACAATATAAATCGTTCAGTGCTCCACCGGAATTGGCCA
GCAATCTACAACAACAAGCTTTAGCTGATAAACAAGAAATGGAACGAGTTAAACGACTTA
CTCTAAATATATCGGAAAGACAAGAAGAAGAAGAATATAGCGCAGAGAGCGGTGGTGGAT
CGGGAGGTATCGGTAATCCTAACAGAGGTCAGCATGTTCGTCAGAAATACCAACATCCCA
AAGGGGCACCGGACGCCGATCTCATATTCGGTCCTAAGAAATTTAAATAAATAAAAAAAA
AGATTTTTATTTGACCACGCAATGTAAATCGTTTAG
(3516 bp) |
