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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp16566_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ER_degradation-enhancing_alpha-mannosidase-like_protein_2_[Amyelois_transitella]
Ontology
GO:0001948 F protein binding
GO:0004559 F alpha-mannosidase activity
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006491 P N-glycan processing
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0097466 P ubiquitin-dependent glycoprotein ERAD pathway
GO:1904154 P positive regulation of retrograde protein transport, ER to cytosol
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
Transcript
Level		FPKM:9.24 TPM:8.56
ORF Entry
Sequence
(Nucleotide)
AAAAATAATAAAAATCCCCCTATAAACTTAATCAGTCAAACAAAATATCACAACTCCAGT
TGCTTCTTATTTAAGAATTCTCCGGCCAACGATATTCTTTGTAGAAACGACGGAGCCGGC
GTCAATAATAACTCGTACTTATATACATCGGAATGATCTGGATACTTCTGTTCTCTACGT
ATCCTTTCTAACATCTTCTGCGGTTCGCATTTCGGTTTCGATTTCCAATCGCTGTTCAAA
AAGTCTTGTATAACTTTAGGCAGCATGTTCATGACTTCTTTCGTTTTCGTGACGCTTGGC
AGTTGCACCTCCGATTTCTCTGGCACGATTATGTCGTCCACTTCAACGGTTTGCGACGAT
CCTGCCGTTGGTTCTTCGACTGAAAGTTTAACATTTTCTTGTGTTTCAGCTTTTATAGTG
TCGTTGTAATATTTATTGATCGTCTCTTTAACAAGATCACTGAGGTTTGATTCGTTTGCG
TTCTCCCTTTCCGTTCCATCGAGGTTGACGTATCCGGTTCTCGATTCAGTCTTTATCAAT
ACTTGATTTTGTTTAGGCTCGTTTTCATCTGTTCTTTCCAACAGTTCGGTATTTTCAATA
GTTTTATTTTCTATTCCACTCTCATTATTGTCGTTGTTCGATTGAGTGATCTTAGTTTCA
TTGGTGTTCGCTTCTATCATAGTCATAAATTTTATATTATCTTCTTCTTCCAAAATTTGG
TATATACTGTAAACCTCGCTGATATTTATTCCTTGTCTAGCTTCATGGCAGCAATACAGC
ATGTTAGGGTCAATCGGATGTGCTTCTGTATTGAAGATGTATCCGCCAAGGTCGACTACG
CATTCGCCATTAGGTGTGTCGATGACAGTACCGCGGACCCCAGGGTTGTGAATGAAATTA
TCCGGATCGAACAGTAAGTACAGGTATTTTGTGGTTTCGGCTAAGAAAAATGATTCCATG
CGATCTTCTTTGCGATGGTCACGAACGTCTTTTATCGTTGCATACCCACACGGTGTCCTG
GCACTATGCTGTATGCTCCTCAAGATATCTTCGCCCATTTGCAACAGTATAGGGTCTCTG
GTGTCTCGGTACAAATACATGATTGACTCTATGAGTTCGGGTCGTAGCGGATAACTCTCG
CGTGACGAAGACGCCTCACCCGTCCCGAGATTGTACACTTCAGGTGTAAATCCATATTGG
CGCCACACGCTGTGGTAGTTGTGAATTATGCGCATCGCTGCGTCACTTTCGCCTATGAGG
CTTAAAAGACCTGGCCAATATGATTCAAGAGACTGAAAGACAGGTAAGGTGACGTGCCCA
CGCAACATAGTGGCCCACACAAACCAATCATCTTTTTTCAGATACTTCTCAATCGATTGT
CTTGCTTCTAAAAACATGGACATTAACTCTGGCTTCTCTAGTAGTATGGCACCTTTAACC
AAATATTCATAATAAGAATCGATTCCACCACCAATTCCAGCATCTTGAGCTGTCCAGCGT
CCAGTCATCACATCTATGTGGTTGCCAAGGAGACCAATTGGTGATCTATGATGGTATAAG
GCTTTCAAAGCATTGTAAGCTACCTCTTCATACAATGGATCTCCTGTCAGTCTACTCAAA
GTACCAAACTCAATTATAAATGTACCAACTCCAGCAGTGCACGTGATACTAGTTTCCCCA
GGTGGAACACCTGATCGCAAGTTAATTGTTCCATAAGGCATTCCAGTAGTTGTATCAAAT
GCAGCTATTAGTCTCTGTGCTACATCTTCAGCTAAACGAAGTAAAGGACCATTGCATGGC
CAGCCTGGTTCTAATTTCATCCCAGTTTTATGTGACAGTAAATGAGCACTCAATAAACCG
CCAACAATTCTAATATTCGTCTCAAACACTGAAACGTTAATGTCTGCATCAAAGTGTCTT
TTCTGTAGTACTATATCTACTACTCGATTAAATTCACTATAGTTTCCCATAATGGCAAGC
GTGTCCAATGCATCAATGAGGGTGAGTGAGTAACTGCCCCAGGTGTCAACACCGTCGCAG
CTCAATGGACGTAATTCGTCATAAGGATATGCATATCTTAAATAGCTGTCGTATGCATGT
TGAAACATTTCACGTACTTCCTCTCTTAGTTTAAGTATATCTGCACGTTTGTATACTCGT
ACACTTAAAATTAAATTACAAGTCAACACTGAAATACTGATCAGGAAGGTTAATTTGACC
ATTTTTATTAGTTTTTTGTCTTTTTTAATTATTTACATTTGCATAAACTTTCCTATAGTT
TCCAGCTG
(2288 bp)

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