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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp16360_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA-splicing_factor_ISY1_homolog_[Papilio_xuthus]
Ontology
GO:0000350 P generation of catalytic spliceosome for second transesterification step
GO:0000384 F first spliceosomal transesterification activity
GO:0000389 P mRNA 3'-splice site recognition
GO:0000974 C Prp19 complex
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0071012 C catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0071014 C post-mRNA release spliceosomal complex
GO:0071020 C post-spliceosomal complex
Transcript
Level		FPKM:1.97 TPM:1.82
ORF Entry
Sequence
(Nucleotide)
AAAACTCGCACTAAGCACACAGAAAAATGTTAGGTGGCCGTCAGCTCTTCTCTATTTTGG
CGTCTAGGCATCCATATTTCTCCATTAGTTCCTGCTTCTTCCTCCTGAGCAATGCTTCTT
CGACGTCCCTCTGCGACGGCACGGCCACGTGGGAGGTGACCGTTGCTTTCTCGGGTTCTT
CTTCATCGTCTTCCATCCTCTTGTCGTCAGGATCTTCAGGATAGATATTTTCCTCTTCGG
GAAGGTCTTGATCTTTGTTGAGTTCCTTGTTTCTTTTCCATTCATCGACTGCACGTGCTA
TCGCTGCTTTTTCAGCCTCTTGTTCTAATGGTAGTAAAATGCCGTCGTCGTCGTCTCTGT
AGCCGTAGTAATCTGCGTCGACGTCTCTCATGAGGTCCGCTCTCGTCCGGCGAGGGGGCG
GAGGCGGCTCTTGTTCGAATAGCTCTCGCACGCCGGGTAAATCCTTTGCAGCTCCAAAGT
ATTTGTATCCCCGGTTGCCCGGCACTTCTTTCCCGTCCTGGTCCAACATTTTAGGACCGA
CTCGAGCATGATCGGGGCCGCCCAAAGATTTAATCTGCACCTCCCAATGTCGCTTCTCCC
TCATAAGTTTATTAATTTCGTCGTTAAGATCGCGAATCCGGAACTCTCCGAGACCGGCAT
TCTGTATCTGTGCCACTTTTTTCGCAATTTCTCTGACAATCTGTAACCTCCACTTCTCGG
CTTGTGGTAAATCATTACATTCTGATGCAAGATACGGACGTCGTTCTCGCTGGCCTCCCG
CTTCCTGAACTTGTGCCGCACGCCAACGTGCTAGTGTTGTCATTGCTTTCTCTGCGTTTC
TGGCCATGGTTTAAATTGTATTTACAATTTCGGTTTTTGGGATCAAGACCATTCAAATTT
CAATAAAACTTTATTTTATAGTGGAGCTGTATGGTATTTGAGGTAGATTCTCATAAAAAA
AAGTGATAATTCCTTGAATAAAT
(983 bp)

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